RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 TMEM158Q8WZ71 300 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 MRAP2Q96G30 205 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 C18orf15Q96N68 181 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 K7EMT4 169 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 KIR3DS1Q14943 382 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 PRR9Q5T870 116 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 ADAMTSL5Q6ZMM2 481 aa19.79■□□□□ 0.76
HLA-C-208ENST00000487245 TMEM89A2RUT3 159 aa19.78■□□□□ 0.76
HLA-C-208ENST00000487245 ZFAND2AQ8N6M9 145 aa19.78■□□□□ 0.76
HLA-C-208ENST00000487245 A6NDN8 102 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 SPANXN1Q5VSR9 72 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 WFDC3Q8IUB2 231 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 NRGNQ92686 78 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 DAZ1Q9NQZ3 744 aaKnown RBP19.77■□□□□ 0.76
HLA-C-208ENST00000487245 HHLA3Q9XRX5 114 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 TRBV7-9A0A0J9YWB2 115 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 C7orf71A4D174 169 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 MED14OSP0DP75 135 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 LAGE3Q14657 143 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 FAM19A4Q96LR4 140 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 RHPN1-AS1Q9BWJ2 59 aa19.77■□□□□ 0.76
HLA-C-208ENST00000487245 A0A096LNT2 108 aa19.76■□□□□ 0.75
HLA-C-208ENST00000487245 H3BRM9 83 aa19.76■□□□□ 0.75
HLA-C-208ENST00000487245 DEFB112Q30KQ8 113 aa19.76■□□□□ 0.75
HLA-C-208ENST00000487245 SAMD13Q5VXD3 122 aa19.76■□□□□ 0.75
HLA-C-208ENST00000487245 TRAV21A0A0B4J279 112 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 HLA-DRB4P13762 266 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 AMMECR1LQ6DCA0 310 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 APRG1Q8IVJ8 170 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 HLA-DRB4X5D2U9 266 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 IGKCP01834 107 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 PRSS1P07477 247 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 SMIM17P0DL12 118 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 Q6ZQT7 251 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 HIGD1BQ9P298 99 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 UFC1Q9Y3C8 167 aa19.75■□□□□ 0.75
HLA-C-208ENST00000487245 SPTAN1Q13813 2472 aaKnown RBP19.74■□□□□ 0.75
HLA-C-208ENST00000487245 H3BVH4 76 aa19.74■□□□□ 0.75
HLA-C-208ENST00000487245 RPL11P62913 178 aaKnown RBP19.74■□□□□ 0.75
HLA-C-208ENST00000487245 PCP2Q8IVA1 136 aa19.74■□□□□ 0.75
HLA-C-208ENST00000487245 NMUP48645 174 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 RNASE8Q8TDE3 154 aaKnown RBP19.73■□□□□ 0.75
HLA-C-208ENST00000487245 TRAV8-6A0A0B4J262 113 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 DPM2O94777 84 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 IGHV4-59P01825 116 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 PSMB8P28062 276 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 SRSF1Q07955 248 aaKnown RBP eCLIP19.73■□□□□ 0.75
HLA-C-208ENST00000487245 TM4SF20Q53R12 229 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 ERASQ7Z444 233 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 FOXC2Q99958 501 aa19.73■□□□□ 0.75
HLA-C-208ENST00000487245 LCNL1Q6ZST4 164 aa19.72■□□□□ 0.75
HLA-C-208ENST00000487245 ASH1LQ9NR48 2969 aaKnown RBP19.72■□□□□ 0.75
HLA-C-208ENST00000487245 MYOZ3Q8TDC0 251 aa19.71■□□□□ 0.75
HLA-C-208ENST00000487245 IGSF10Q6WRI0 2623 aa19.71■□□□□ 0.75
HLA-C-208ENST00000487245 C9orf118A6NHY6 69 aa19.71■□□□□ 0.75
HLA-C-208ENST00000487245 TGFAP01135 160 aa19.71■□□□□ 0.75
HLA-C-208ENST00000487245 ID1P41134 155 aa19.7■□□□□ 0.74
HLA-C-208ENST00000487245 SMIM2Q9BVW6 85 aa19.7■□□□□ 0.74
HLA-C-208ENST00000487245 TRAV26-2A0A0B4J265 109 aa19.69■□□□□ 0.74
HLA-C-208ENST00000487245 K7EMI3 77 aa19.69■□□□□ 0.74
HLA-C-208ENST00000487245 ASIPP42127 132 aa19.69■□□□□ 0.74
HLA-C-208ENST00000487245 C20orf78Q9BR46 151 aa19.69■□□□□ 0.74
HLA-C-208ENST00000487245 CFAP46Q8IYW2 2715 aa19.68■□□□□ 0.74
HLA-C-208ENST00000487245 PRB1P04280 392 aa19.68■□□□□ 0.74
HLA-C-208ENST00000487245 RBX1P62877 108 aa19.68■□□□□ 0.74
HLA-C-208ENST00000487245 CSMD1Q96PZ7 3565 aa19.68■□□□□ 0.74
HLA-C-208ENST00000487245 IGKV2D-26A0A0A0MRZ7 120 aa19.67■□□□□ 0.74
HLA-C-208ENST00000487245 M0R381 172 aa19.67■□□□□ 0.74
HLA-C-208ENST00000487245 DPH3P1Q9H4G8 78 aa19.67■□□□□ 0.74
HLA-C-208ENST00000487245 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.67■□□□□ 0.74
HLA-C-208ENST00000487245 A0A087WX48 190 aa19.67■□□□□ 0.74
HLA-C-208ENST00000487245 TCTAP57738 103 aa19.66■□□□□ 0.74
HLA-C-208ENST00000487245 BBC3Q96PG8 261 aaPredicted RBP19.66■□□□□ 0.74
HLA-C-208ENST00000487245 TRAV12-1A0A0B4J245 112 aa19.65■□□□□ 0.74
HLA-C-208ENST00000487245 TMEM95Q3KNT9 176 aa19.65■□□□□ 0.74
HLA-C-208ENST00000487245 ORMDL2Q53FV1 153 aa19.65■□□□□ 0.74
HLA-C-208ENST00000487245 FSHBP01225 129 aa19.65■□□□□ 0.74
HLA-C-208ENST00000487245 ANXA2RQ3ZCQ2 193 aa19.65■□□□□ 0.74
HLA-C-208ENST00000487245 POM121L12Q8N7R1 296 aa19.65■□□□□ 0.74
HLA-C-208ENST00000487245 NXPH4O95158 308 aa19.64■□□□□ 0.73
HLA-C-208ENST00000487245 S100A4P26447 101 aaKnown RBP19.64■□□□□ 0.73
HLA-C-208ENST00000487245 CDKN1BP46527 198 aa19.64■□□□□ 0.73
HLA-C-208ENST00000487245 UFSP1Q6NVU6 142 aa19.64■□□□□ 0.73
HLA-C-208ENST00000487245 BEX4Q9NWD9 120 aaPredicted RBP19.64■□□□□ 0.73
HLA-C-208ENST00000487245 J3KRW8 73 aa19.63■□□□□ 0.73
HLA-C-208ENST00000487245 RNASE4P34096 147 aaKnown RBP19.63■□□□□ 0.73
HLA-C-208ENST00000487245 ZC2HC1BQ5TFG8 222 aa19.63■□□□□ 0.73
HLA-C-208ENST00000487245 ZNF843Q8N446 348 aa19.63■□□□□ 0.73
HLA-C-208ENST00000487245 RASL10AQ92737 203 aa19.63■□□□□ 0.73
HLA-C-208ENST00000487245 AP1S3Q96PC3 154 aa19.63■□□□□ 0.73
HLA-C-208ENST00000487245 MRPL35Q9NZE8 188 aaKnown RBP19.63■□□□□ 0.73
HLA-C-208ENST00000487245 VPREB3Q9UKI3 123 aa19.63■□□□□ 0.73
HLA-C-208ENST00000487245 SUMO2P61956 95 aaKnown RBP19.62■□□□□ 0.73
HLA-C-208ENST00000487245 PHLDA3Q9Y5J5 127 aa19.62■□□□□ 0.73
HLA-C-208ENST00000487245 EPG5Q9HCE0 2579 aa19.62■□□□□ 0.73
HLA-C-208ENST00000487245 IGKV3-7A0A075B6H7 116 aa19.62■□□□□ 0.73
HLA-C-208ENST00000487245 PLNP26678 52 aa19.62■□□□□ 0.73
HLA-C-208ENST00000487245 Q6YL49 198 aa19.62■□□□□ 0.73
HLA-C-208ENST00000487245 GTF2H5Q6ZYL4 71 aa19.62■□□□□ 0.73
HLA-C-208ENST00000487245 SPG11Q96JI7 2443 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms