RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 ARL6Q9H0F7 186 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 PXMP4Q9Y6I8 212 aa2.66□□□□□ -1.98
SNRNP40-205ENST00000486941 TRGV2A0A075B6R0 118 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 TRAV9-2A0A087WT02 112 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 A0A087WTM6 91 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 TRGV1A0A0A0MS02 117 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 TRAV12-3A0A0B4J271 114 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 C9orf170A2RU37 121 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 H3BQ15 152 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC17A3O00476 420 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 AGPAT2O15120 278 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SPINK4O60575 86 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 TSC22D2O75157 780 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF253O75346 499 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF324O75467 553 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 CCNKO75909 580 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 NXPH4O95158 308 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC25A5P05141 298 aaKnown RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 METTL15P1P0C7V9 234 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 CT45A10P0DMU9 189 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 IGLC2P0DOY2 106 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 PRB4P10163 310 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 TAS2R30P59541 319 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 RRAS2P62070 204 aaPredicted RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC38A11Q08AI6 406 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SLAQ13239 276 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 MRPL23Q16540 153 aaKnown RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 CNPY1Q3B7I2 92 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 Q5VSD8 79 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 C10orf113Q5VZT2 155 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 LYPD5Q6UWN5 251 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 ZNF546Q86UE3 836 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SLC7A5P1Q8MH63 180 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 EIF4E3Q8N5X7 224 aaKnown RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 TMEM37Q8WXS4 190 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 LINC00477Q96M19 166 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 MRPS26Q9BYN8 205 aaKnown RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 SLIRPQ9GZT3 109 aaKnown RBP2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 DNAJC4Q9NNZ3 241 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 GSN-AS1Q9NRJ2 163 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 NDUFA13Q9P0J0 144 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 FUT9Q9Y231 359 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 ICOSQ9Y6W8 199 aa2.65□□□□□ -1.99
SNRNP40-205ENST00000486941 FAT1Q14517 4588 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 LOC105371267A0A1B0GV96 52 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 LINC00854A0A1B0GVQ3 168 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 C7orf71A4D174 169 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 H3BTX0 84 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 SSSCA1O60232 199 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 COX7A2P2O60397 106 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 MPDU1O75352 247 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 NMBP08949 121 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 SNRPCP09234 159 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 OR4E1P0C645 316 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 CRISP2P16562 243 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 FUSP35637 526 aaKnown RBP eCLIP2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 CRYBA4P53673 196 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 TCL1AP56279 114 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 RAB31Q13636 194 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 OPCMLQ14982 345 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 NDUFA5Q16718 116 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 PYDC2Q56P42 97 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 IBA57Q5T440 356 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 Q6ZRG5 221 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 NEGR1Q7Z3B1 354 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 C12orf45Q8N5I9 185 aaPredicted RBP2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 OR1L4Q8NGR5 311 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 MCFD2Q8NI22 146 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 MRPL53Q96EL3 112 aaKnown RBP2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 FAM19A4Q96LR4 140 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 MGST2Q99735 147 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 AGPAT4-IT1Q9H0P7 198 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 PRO0255Q9UI72 69 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 HHLA3Q9XRX5 114 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 PRELID1Q9Y255 219 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 LY96Q9Y6Y9 160 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 VPS13BQ7Z7G8 4022 aa2.64□□□□□ -1.99
SNRNP40-205ENST00000486941 TRBV19A0A075B6N1 114 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 TRAV5A0A0B4J249 113 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 TRBV7-9A0A0J9YWB2 115 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 C7orf66A4D0T2 115 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 NAP1L6A6NFF2 107 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 PGPEP1LA6NFU8 196 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 H3BMQ9 156 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 PRAF2O60831 178 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 NDUFB6O95139 128 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 SMR3BP02814 79 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 GPX1P07203 203 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 HIST1H1EP10412 219 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 EVI2AP22794 236 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 S100A5P33763 92 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 RNASE4P34096 147 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 RPL29P47914 159 aaKnown RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 CAMLGP49069 296 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 CD300CQ08708 224 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 ERCC8Q13216 396 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 PDE6HQ13956 83 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 IAH1Q2TAA2 248 aaPredicted RBP2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 MIC13Q5XKP0 118 aa2.63□□□□□ -1.99
SNRNP40-205ENST00000486941 NRARPQ7Z6K4 114 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms