RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 MGST1P10620 155 aaKnown RBP13.64□□□□□ -0.23
ATG9A-221ENST00000486766 CRIP1P50238 77 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 ZNF415Q09FC8 603 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 TDRG1Q3Y452 100 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 CLLU1Q5K131 121 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 IBA57Q5T440 356 aaKnown RBP13.64□□□□□ -0.23
ATG9A-221ENST00000486766 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 MLST8Q9BVC4 326 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 NOP10Q9NPE3 64 aaKnown RBP13.64□□□□□ -0.23
ATG9A-221ENST00000486766 GSN-AS1Q9NRJ2 163 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 C11orf21Q9P2W6 132 aa13.64□□□□□ -0.23
ATG9A-221ENST00000486766 ORM1P02763 201 aa13.63□□□□□ -0.23
ATG9A-221ENST00000486766 TYMSP04818 313 aa13.63□□□□□ -0.23
ATG9A-221ENST00000486766 PEA15Q15121 130 aa13.63□□□□□ -0.23
ATG9A-221ENST00000486766 C11orf72Q8NBR9 251 aa13.63□□□□□ -0.23
ATG9A-221ENST00000486766 SMIM12Q96EX1 92 aa13.63□□□□□ -0.23
ATG9A-221ENST00000486766 GNRH2O43555 120 aa13.62□□□□□ -0.23
ATG9A-221ENST00000486766 SRP19P09132 144 aaKnown RBP13.62□□□□□ -0.23
ATG9A-221ENST00000486766 TCL1AP56279 114 aa13.62□□□□□ -0.23
ATG9A-221ENST00000486766 TRBV20OR9-2A0A075B6H5 130 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 PGPEP1LA6NFU8 196 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 B4DEV8 164 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 C9JCJ5 164 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 IGLV2-8P01709 118 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 DAD1P61803 113 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 SRSF3P84103 164 aaKnown RBP13.61□□□□□ -0.23
ATG9A-221ENST00000486766 MDFICQ9P1T7 246 aa13.61□□□□□ -0.23
ATG9A-221ENST00000486766 M0R036 132 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 DEFB130BP0DP73 79 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 DEFB130AP0DP74 79 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 DAZ2Q13117 558 aaKnown RBP13.6□□□□□ -0.23
ATG9A-221ENST00000486766 C12orf74Q32Q52 190 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 Q6ZTC4 211 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 SMDT1Q9H4I9 107 aa13.6□□□□□ -0.23
ATG9A-221ENST00000486766 IGKV3D-20A0A0C4DH25 116 aa13.59□□□□□ -0.23
ATG9A-221ENST00000486766 IGHV3-16A0A0C4DH30 117 aa13.59□□□□□ -0.23
ATG9A-221ENST00000486766 ZFAND6Q6FIF0 208 aa13.59□□□□□ -0.23
ATG9A-221ENST00000486766 BIN3Q9NQY0 253 aa13.59□□□□□ -0.23
ATG9A-221ENST00000486766 ZNF727A8MUV8 499 aa13.58□□□□□ -0.24
ATG9A-221ENST00000486766 KRBOX1C9JBD0 128 aa13.58□□□□□ -0.24
ATG9A-221ENST00000486766 OR5I1Q13606 314 aa13.58□□□□□ -0.24
ATG9A-221ENST00000486766 LINC01559Q495D7 138 aa13.58□□□□□ -0.24
ATG9A-221ENST00000486766 DAZAP1Q96EP5 407 aaKnown RBP13.58□□□□□ -0.24
ATG9A-221ENST00000486766 TMSB15BA0A087X1C1 80 aa13.57□□□□□ -0.24
ATG9A-221ENST00000486766 TRGV1A0A0A0MS02 117 aa13.57□□□□□ -0.24
ATG9A-221ENST00000486766 C9JQL5 133 aa13.57□□□□□ -0.24
ATG9A-221ENST00000486766 C3orf84H3BNL1 204 aa13.57□□□□□ -0.24
ATG9A-221ENST00000486766 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
ATG9A-221ENST00000486766 ASIPP42127 132 aa13.57□□□□□ -0.24
ATG9A-221ENST00000486766 PHLDA1Q8WV24 401 aaPredicted RBP13.57□□□□□ -0.24
ATG9A-221ENST00000486766 SPXQ9BT56 116 aa13.57□□□□□ -0.24
ATG9A-221ENST00000486766 GAGE12BA1L429 117 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 GAGE7O76087 117 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 GAGE12FP0CL80 117 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 GAGE12GP0CL81 117 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 GAGE12IP0CL82 117 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 Q6ZTI0 123 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 OCC1Q8TAD7 63 aa13.56□□□□□ -0.24
ATG9A-221ENST00000486766 MRPL16Q9NX20 251 aaKnown RBP13.56□□□□□ -0.24
ATG9A-221ENST00000486766 TRAV10A0A0B4J240 114 aa13.55□□□□□ -0.24
ATG9A-221ENST00000486766 NUPR2A6NF83 97 aa13.55□□□□□ -0.24
ATG9A-221ENST00000486766 SPINK4O60575 86 aa13.55□□□□□ -0.24
ATG9A-221ENST00000486766 HTN3P15516 51 aa13.55□□□□□ -0.24
ATG9A-221ENST00000486766 RPL19P84098 196 aaKnown RBP13.55□□□□□ -0.24
ATG9A-221ENST00000486766 GRIFINA4D1Z8 144 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 K7EN84 100 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 P01737 135 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 LGALS9BQ3B8N2 356 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 FAM74A3Q4VXF1 159 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 LINC00612Q8N6U2 182 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 LY96Q9Y6Y9 160 aa13.54□□□□□ -0.24
ATG9A-221ENST00000486766 TRGV2A0A075B6R0 118 aa13.53□□□□□ -0.24
ATG9A-221ENST00000486766 DEFB131BA0A096LNP1 70 aa13.53□□□□□ -0.24
ATG9A-221ENST00000486766 H3BVH4 76 aa13.53□□□□□ -0.24
ATG9A-221ENST00000486766 M0R2P5 195 aa13.53□□□□□ -0.24
ATG9A-221ENST00000486766 RNASE3P12724 160 aaKnown RBP13.53□□□□□ -0.24
ATG9A-221ENST00000486766 CASC10Q5T4H9 136 aa13.53□□□□□ -0.24
ATG9A-221ENST00000486766 C9orf85Q96MD7 179 aa13.53□□□□□ -0.24
ATG9A-221ENST00000486766 CSMD3Q7Z407 3707 aa13.52□□□□□ -0.24
ATG9A-221ENST00000486766 C19orf71A6NCJ1 209 aa13.52□□□□□ -0.25
ATG9A-221ENST00000486766 ATP5G1P05496 136 aa13.52□□□□□ -0.25
ATG9A-221ENST00000486766 SOHLH1Q5JUK2 328 aa13.52□□□□□ -0.25
ATG9A-221ENST00000486766 CEMP1Q6PRD7 247 aaPredicted RBP13.52□□□□□ -0.25
ATG9A-221ENST00000486766 MUC4Q99102 2169 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 SFTA3P0C7M3 94 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 TMEM241Q24JQ0 296 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 DNLZQ5SXM8 178 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 LINC01551Q86U37 167 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 OR2D3Q8NGH3 330 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 RNASE7Q9H1E1 156 aaKnown RBP13.51□□□□□ -0.25
ATG9A-221ENST00000486766 IL36BQ9NZH7 164 aa13.51□□□□□ -0.25
ATG9A-221ENST00000486766 KLK5Q9Y337 293 aaPredicted RBP13.51□□□□□ -0.25
ATG9A-221ENST00000486766 ARMS2P0C7Q2 107 aa13.5□□□□□ -0.25
ATG9A-221ENST00000486766 NUDT10Q8NFP7 164 aa13.5□□□□□ -0.25
ATG9A-221ENST00000486766 NUDT11Q96G61 164 aa13.5□□□□□ -0.25
ATG9A-221ENST00000486766 NAT8Q9UHE5 227 aa13.5□□□□□ -0.25
ATG9A-221ENST00000486766 XKRY2A2RUG3 117 aa13.49□□□□□ -0.25
ATG9A-221ENST00000486766 CXCL1P09341 107 aa13.49□□□□□ -0.25
ATG9A-221ENST00000486766 RPS20P60866 119 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms