RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 WDR86Q86TI4 376 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 RNF114Q9Y508 228 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 K7EM74 188 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 APOC4P55056 127 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 ATG2BQ96BY7 2078 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 FAM240AA0A1B0GVK7 77 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 Q0VFX4 171 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 C9orf47Q6ZRZ4 202 aa6.94□□□□□ -1.3
GABRE-209ENST00000486255 LINC01356Q8N9X3 169 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 KIAA1549LQ6ZVL6 1849 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 A4D1N5 150 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 FOXE3Q13461 319 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 SND1-IT1Q9HBX3 110 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 ICE1Q9Y2F5 2266 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 IGKV1-6A0A0C4DH72 117 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 BUB3O43684 328 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 Q6ZUT4 128 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 CLEC2BQ92478 149 aa6.93□□□□□ -1.3
GABRE-209ENST00000486255 OPRPNQ99935 248 aaPredicted RBP6.93□□□□□ -1.3
GABRE-209ENST00000486255 MUC22E2RYF6 1773 aaPredicted RBP6.92□□□□□ -1.3
GABRE-209ENST00000486255 IGKV1OR2-108A0A075B7D4 117 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 JMJD7-PLA2G4BH0Y9G9 81 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 Q6ZQT7 251 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 IGKV2D-24A0A075B6R9 120 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 FAM236DA0A1B0GTK5 79 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 GNRH2O43555 120 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 FAM236CP0DP71 79 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 TDRD6O60522 2096 aaKnown RBP6.92□□□□□ -1.3
GABRE-209ENST00000486255 IL15RAQ13261 267 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 ETV2O00321 342 aaPredicted RBP6.92□□□□□ -1.3
GABRE-209ENST00000486255 FXYD2P54710 66 aa6.92□□□□□ -1.3
GABRE-209ENST00000486255 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 PTPRSQ13332 1948 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 RALGAPA1Q6GYQ0 2036 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 IGHV1-69DA0A0B4J2H0 117 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 C2orf16Q68DN1 1984 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 TIRAPP58753 221 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 ANKRD39Q53RE8 183 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 E9PQ18 207 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 NDUFV3P56181 108 aaKnown RBP6.91□□□□□ -1.3
GABRE-209ENST00000486255 FOXL2NBQ6ZUU3 175 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
GABRE-209ENST00000486255 A0A0G2JNJ9 132 aa6.9□□□□□ -1.3
GABRE-209ENST00000486255 Q9UFV3 132 aa6.9□□□□□ -1.3
GABRE-209ENST00000486255 RBAKDNA6NC62 111 aa6.9□□□□□ -1.3
GABRE-209ENST00000486255 ZNF503Q96F45 646 aa6.9□□□□□ -1.3
GABRE-209ENST00000486255 MAPK1IP1LQ8NDC0 245 aa6.9□□□□□ -1.3
GABRE-209ENST00000486255 RPL39LQ96EH5 51 aaKnown RBP6.9□□□□□ -1.3
GABRE-209ENST00000486255 IGHV7-4-1A0A0J9YVY3 117 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 RNF223E7ERA6 249 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 GATA1P15976 413 aaPredicted RBP6.9□□□□□ -1.31
GABRE-209ENST00000486255 PRO3102Q9H379 93 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 MRPL36Q9P0J6 103 aaKnown RBP6.9□□□□□ -1.31
GABRE-209ENST00000486255 TP53BP1Q12888 1972 aaPredicted RBP6.9□□□□□ -1.31
GABRE-209ENST00000486255 APC2O95996 2303 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 NOTCH4Q99466 2003 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 TRAV23DV6A0A075B6W5 121 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 UBE2E1P51965 193 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 C17orf58Q2M2W7 97 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 C5orf38Q86SI9 138 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 C3orf22Q8N5N4 141 aa6.9□□□□□ -1.31
GABRE-209ENST00000486255 NOP10Q9NPE3 64 aaKnown RBP6.9□□□□□ -1.31
GABRE-209ENST00000486255 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
GABRE-209ENST00000486255 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
GABRE-209ENST00000486255 MBD3L5A6NJ08 208 aaPredicted RBP6.89□□□□□ -1.31
GABRE-209ENST00000486255 G3V318 75 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 MBD3L2Q8NHZ7 208 aaPredicted RBP6.89□□□□□ -1.31
GABRE-209ENST00000486255 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 SLX1AQ9BQ83 275 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 NUPR1O60356 82 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 TDRG1Q3Y452 100 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 H3BT86 120 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 CXCL5P42830 114 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 RP1P56715 2156 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 UQCRQO14949 82 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 HIST2H2BCQ6DN03 193 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 LINC00643Q86TS7 51 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 TIMM17AQ99595 171 aa6.89□□□□□ -1.31
GABRE-209ENST00000486255 A0A0J9YY99 117 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 FAM110AQ9BQ89 295 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 LECT2O14960 151 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 DAND5Q8N907 189 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 DKK4Q9UBT3 224 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 K7EQD1 137 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 GATA4P43694 442 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 CAMK2N2Q96S95 79 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 TOMM6Q96B49 74 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.88□□□□□ -1.31
GABRE-209ENST00000486255 LYPD6BQ8NI32 183 aa6.88□□□□□ -1.31
GABRE-209ENST00000486255 H0Y9J4 135 aa6.87□□□□□ -1.31
GABRE-209ENST00000486255 BPESC1Q9GZL8 116 aa6.87□□□□□ -1.31
GABRE-209ENST00000486255 LY6G6EA0A0G2JKS1 128 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms