RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 TRGV4A0A0C4DH28 118 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 A0A1B0GVG6 124 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 A0A1W2PPQ1 181 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 G3V3Q6 166 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 AKAP14Q86UN6 197 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 KCNS1Q96KK3 526 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 PSG8Q9UQ74 426 aa12.68□□□□□ -0.38
PRPF40A-209ENST00000486100 PKHD1P08F94 4074 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 GGTLC3B5MD39 225 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 M0R2P5 195 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 TAAR5O14804 337 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 TYMSP04818 313 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 SFTA3P0C7M3 94 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 MED14OSP0DP75 135 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 MRPL23Q16540 153 aaKnown RBP12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 KRTAP1-5Q9BYS1 174 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 SDF2L1Q9HCN8 221 aa12.67□□□□□ -0.38
PRPF40A-209ENST00000486100 MUC4Q99102 2169 aa12.66□□□□□ -0.38
PRPF40A-209ENST00000486100 CTXND1A0A1B0GTU2 59 aa12.66□□□□□ -0.38
PRPF40A-209ENST00000486100 A0A1W2PRE2 83 aa12.66□□□□□ -0.38
PRPF40A-209ENST00000486100 IGLV2-11P01706 119 aa12.66□□□□□ -0.38
PRPF40A-209ENST00000486100 ZNF726P1Q15940 193 aa12.66□□□□□ -0.38
PRPF40A-209ENST00000486100 TCTE3Q8IZS6 198 aa12.66□□□□□ -0.38
PRPF40A-209ENST00000486100 TRAV4A0A0B4J268 109 aa12.65□□□□□ -0.38
PRPF40A-209ENST00000486100 FBLL1A6NHQ2 334 aaKnown RBP12.65□□□□□ -0.38
PRPF40A-209ENST00000486100 BTF3P20290 206 aaKnown RBP12.65□□□□□ -0.38
PRPF40A-209ENST00000486100 ZNF80P51504 273 aaPredicted RBP12.65□□□□□ -0.38
PRPF40A-209ENST00000486100 FLI1Q01543 452 aaPredicted RBP12.65□□□□□ -0.38
PRPF40A-209ENST00000486100 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
PRPF40A-209ENST00000486100 ARPC5O15511 151 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 GCGP01275 180 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 LYPD5Q6UWN5 251 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 NEGR1Q7Z3B1 354 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 PRNTQ86SH4 94 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 TMEM75Q8N9X5 138 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 OR4C5Q8NGB2 326 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 CYTL1Q9NRR1 136 aa12.64□□□□□ -0.39
PRPF40A-209ENST00000486100 SIVA1O15304 175 aa12.63□□□□□ -0.39
PRPF40A-209ENST00000486100 PFN1P07737 140 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-209ENST00000486100 SMUG1Q53HV7 270 aa12.63□□□□□ -0.39
PRPF40A-209ENST00000486100 SAPCD1Q5SSQ6 148 aa12.63□□□□□ -0.39
PRPF40A-209ENST00000486100 C11orf21Q9P2W6 132 aa12.63□□□□□ -0.39
PRPF40A-209ENST00000486100 K7EQD1 137 aa12.62□□□□□ -0.39
PRPF40A-209ENST00000486100 NXPH4O95158 308 aa12.62□□□□□ -0.39
PRPF40A-209ENST00000486100 ORM1P02763 201 aa12.62□□□□□ -0.39
PRPF40A-209ENST00000486100 ZFP69Q49AA0 526 aa12.62□□□□□ -0.39
PRPF40A-209ENST00000486100 ZNF575Q86XF7 245 aa12.62□□□□□ -0.39
PRPF40A-209ENST00000486100 NKX6-2Q9C056 277 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-209ENST00000486100 PFDN1O60925 122 aa12.61□□□□□ -0.39
PRPF40A-209ENST00000486100 IFNA7P01567 189 aa12.61□□□□□ -0.39
PRPF40A-209ENST00000486100 GYPEP15421 78 aa12.61□□□□□ -0.39
PRPF40A-209ENST00000486100 SRIP30626 198 aa12.61□□□□□ -0.39
PRPF40A-209ENST00000486100 PCNPQ8WW12 178 aaKnown RBP12.61□□□□□ -0.39
PRPF40A-209ENST00000486100 LINC00479Q96M42 142 aa12.61□□□□□ -0.39
PRPF40A-209ENST00000486100 SMLR1H3BR10 107 aa12.6□□□□□ -0.39
PRPF40A-209ENST00000486100 FGF8P55075 233 aaPredicted RBP12.6□□□□□ -0.39
PRPF40A-209ENST00000486100 UBE2G2P60604 165 aa12.6□□□□□ -0.39
PRPF40A-209ENST00000486100 TRAV34A0A0B4J273 112 aa12.59□□□□□ -0.39
PRPF40A-209ENST00000486100 FAM74A7A6NL05 159 aa12.59□□□□□ -0.39
PRPF40A-209ENST00000486100 C9JCJ5 164 aa12.59□□□□□ -0.39
PRPF40A-209ENST00000486100 C1QBP02746 253 aa12.59□□□□□ -0.39
PRPF40A-209ENST00000486100 PPT1P50897 306 aa12.59□□□□□ -0.39
PRPF40A-209ENST00000486100 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
PRPF40A-209ENST00000486100 HMSDA8MTL9 139 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 PEX7O00628 323 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 CIDEAO60543 219 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 KCNRGQ8N5I3 272 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 HIST1H2BAQ96A08 127 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 PTH2Q96A98 100 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 C9orf85Q96MD7 179 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 ARL2-SNX15V9GYD0 113 aa12.58□□□□□ -0.4
PRPF40A-209ENST00000486100 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
PRPF40A-209ENST00000486100 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
PRPF40A-209ENST00000486100 LINC00315P59091 139 aa12.57□□□□□ -0.4
PRPF40A-209ENST00000486100 ZNF345Q14585 488 aa12.57□□□□□ -0.4
PRPF40A-209ENST00000486100 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
PRPF40A-209ENST00000486100 RYR1P21817 5038 aa12.57□□□□□ -0.4
PRPF40A-209ENST00000486100 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 C16orf90A8MZG2 172 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 RS1O15537 224 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 RNASE3P12724 160 aaKnown RBP12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 CFAP126Q5VTH2 177 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 DPPA3Q6W0C5 159 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
PRPF40A-209ENST00000486100 TRAV9-2A0A087WT02 112 aa12.55□□□□□ -0.4
PRPF40A-209ENST00000486100 IGKV3D-20A0A0C4DH25 116 aa12.55□□□□□ -0.4
PRPF40A-209ENST00000486100 LOC100131303A0A0U1RQF7 123 aa12.55□□□□□ -0.4
PRPF40A-209ENST00000486100 PGPEP1LA6NFU8 196 aa12.55□□□□□ -0.4
PRPF40A-209ENST00000486100 OR11H4Q8NGC9 324 aa12.55□□□□□ -0.4
PRPF40A-209ENST00000486100 SEC11BP0C7V7 166 aa12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 FHITP49789 147 aa12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 Q86TA4 180 aa12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 SLC25A29Q8N8R3 303 aa12.54□□□□□ -0.4
PRPF40A-209ENST00000486100 KRTAP17-1Q9BYP8 105 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms