RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 E9PLD3 99 aa17.15■□□□□ 0.34
CLN5-202ENST00000485938 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.15■□□□□ 0.34
CLN5-202ENST00000485938 TRAV12-1A0A0B4J245 112 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 A0A1W2PPR1 153 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 IGF1P05019 195 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 ATP5G2Q06055 141 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 ITLN2Q8WWU7 325 aaPredicted RBP17.14■□□□□ 0.33
CLN5-202ENST00000485938 C20orf173Q96LM9 149 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 C5orf56Q8N8D9 126 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 GLMPQ8WWB7 406 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 LENEPQ9Y5L5 61 aa17.14■□□□□ 0.33
CLN5-202ENST00000485938 CHD8Q9HCK8 2581 aa17.13■□□□□ 0.33
CLN5-202ENST00000485938 IGLL5B9A064 214 aa17.13■□□□□ 0.33
CLN5-202ENST00000485938 H7C1H1 209 aa17.13■□□□□ 0.33
CLN5-202ENST00000485938 F8VRH5 84 aa17.12■□□□□ 0.33
CLN5-202ENST00000485938 C9orf139Q6ZV77 190 aa17.12■□□□□ 0.33
CLN5-202ENST00000485938 SVEP1Q4LDE5 3571 aa17.12■□□□□ 0.33
CLN5-202ENST00000485938 ASH1LQ9NR48 2969 aaKnown RBP17.12■□□□□ 0.33
CLN5-202ENST00000485938 RPL24P83731 157 aaKnown RBP17.12■□□□□ 0.33
CLN5-202ENST00000485938 AGRNO00468 2067 aa17.11■□□□□ 0.33
CLN5-202ENST00000485938 TEX48A0A1B0GUV7 120 aa17.11■□□□□ 0.33
CLN5-202ENST00000485938 C12orf74Q32Q52 190 aa17.11■□□□□ 0.33
CLN5-202ENST00000485938 ORMDL2Q53FV1 153 aa17.1■□□□□ 0.33
CLN5-202ENST00000485938 ZFAND2AQ8N6M9 145 aa17.1■□□□□ 0.33
CLN5-202ENST00000485938 RASL10AQ92737 203 aa17.1■□□□□ 0.33
CLN5-202ENST00000485938 TOMM6Q96B49 74 aa17.1■□□□□ 0.33
CLN5-202ENST00000485938 NPFFO15130 113 aa17.1■□□□□ 0.33
CLN5-202ENST00000485938 ATP6V0BQ99437 205 aa17.1■□□□□ 0.33
CLN5-202ENST00000485938 SUMO2P61956 95 aaKnown RBP17.09■□□□□ 0.33
CLN5-202ENST00000485938 FOXI2Q6ZQN5 318 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 HIST1H4GQ99525 98 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 NCOR2Q9Y618 2525 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 TRBV7-3A0A075B6L6 115 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 J3KRW8 73 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 M0R381 172 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 C19orf54Q5BKX5 351 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 GPHB5Q86YW7 130 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 ZNF479Q96JC4 524 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 LINC00477Q96M19 166 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 SCGB3A1Q96QR1 104 aa17.09■□□□□ 0.33
CLN5-202ENST00000485938 CHTOPQ9Y3Y2 248 aaKnown RBP17.09■□□□□ 0.33
CLN5-202ENST00000485938 SPRY2O43597 315 aa17.08■□□□□ 0.33
CLN5-202ENST00000485938 SLC25A16P16260 332 aa17.08■□□□□ 0.33
CLN5-202ENST00000485938 LMO4P61968 165 aa17.08■□□□□ 0.33
CLN5-202ENST00000485938 C20orf78Q9BR46 151 aa17.08■□□□□ 0.33
CLN5-202ENST00000485938 KLK15Q9H2R5 256 aa17.08■□□□□ 0.33
CLN5-202ENST00000485938 TRAV41A0A0B4J266 112 aa17.08■□□□□ 0.32
CLN5-202ENST00000485938 TMEM238C9JI98 176 aa17.08■□□□□ 0.32
CLN5-202ENST00000485938 TMEM219Q86XT9 240 aa17.08■□□□□ 0.32
CLN5-202ENST00000485938 NEXN-AS1Q8NBZ9 246 aa17.08■□□□□ 0.32
CLN5-202ENST00000485938 FAM223BA6NKX1 122 aa17.07■□□□□ 0.32
CLN5-202ENST00000485938 LINC01619G3V211 115 aa17.07■□□□□ 0.32
CLN5-202ENST00000485938 FAM223AQ8IWN6 122 aa17.07■□□□□ 0.32
CLN5-202ENST00000485938 RPL39LQ96EH5 51 aaKnown RBP17.07■□□□□ 0.32
CLN5-202ENST00000485938 KLRB1Q12918 225 aa17.07■□□□□ 0.32
CLN5-202ENST00000485938 DPH3P1Q9H4G8 78 aa17.07■□□□□ 0.32
CLN5-202ENST00000485938 TRAV21A0A0B4J279 112 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 MYMXA0A1B0GTQ4 84 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 OR11H12B2RN74 326 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 ARL3P36405 182 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 UCNP55089 124 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 OR11H1Q8NG94 326 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 OR11H2Q8NH07 326 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 LINC00527Q9UJ94 153 aa17.06■□□□□ 0.32
CLN5-202ENST00000485938 RNF223E7ERA6 249 aa17.05■□□□□ 0.32
CLN5-202ENST00000485938 UNQ9165/PRO28630Q6UXU0 137 aa17.05■□□□□ 0.32
CLN5-202ENST00000485938 C14orf178Q8N769 122 aaPredicted RBP17.05■□□□□ 0.32
CLN5-202ENST00000485938 OR10J6PQ8NGY7 276 aa17.05■□□□□ 0.32
CLN5-202ENST00000485938 COL6A6A6NMZ7 2263 aa17.05■□□□□ 0.32
CLN5-202ENST00000485938 F8W1H4 67 aa17.05■□□□□ 0.32
CLN5-202ENST00000485938 SOCS3O14543 225 aa17.05■□□□□ 0.32
CLN5-202ENST00000485938 SPTBN1Q01082 2364 aaKnown RBP17.05■□□□□ 0.32
CLN5-202ENST00000485938 A0A1B0GWB2 263 aa17.04■□□□□ 0.32
CLN5-202ENST00000485938 OVOL1O14753 267 aa17.04■□□□□ 0.32
CLN5-202ENST00000485938 S100A4P26447 101 aaKnown RBP17.04■□□□□ 0.32
CLN5-202ENST00000485938 ASIPP42127 132 aa17.04■□□□□ 0.32
CLN5-202ENST00000485938 WFDC2Q14508 124 aa17.04■□□□□ 0.32
CLN5-202ENST00000485938 MOB4Q9Y3A3 225 aa17.04■□□□□ 0.32
CLN5-202ENST00000485938 BPESC1Q9GZL8 116 aa17.04■□□□□ 0.32
CLN5-202ENST00000485938 SPANXB1Q9NS25 103 aaPredicted RBP17.04■□□□□ 0.32
CLN5-202ENST00000485938 TRBV12-3P01733 135 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 CRIP2P52943 208 aaPredicted RBP17.03■□□□□ 0.32
CLN5-202ENST00000485938 DEFB1P60022 68 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 RRN3P1Q2M238 152 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 ANXA2RQ3ZCQ2 193 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 PHLDA3Q9Y5J5 127 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 BAALCQ8WXS3 180 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 UBTD1Q9HAC8 227 aa17.03■□□□□ 0.32
CLN5-202ENST00000485938 C2orf66Q6UXQ4 117 aa17.02■□□□□ 0.32
CLN5-202ENST00000485938 SPOCK3Q9BQ16 436 aa17.02■□□□□ 0.32
CLN5-202ENST00000485938 H3BMG7 143 aa17.02■□□□□ 0.31
CLN5-202ENST00000485938 MED14OSP0DP75 135 aa17.02■□□□□ 0.31
CLN5-202ENST00000485938 FAM19A4Q96LR4 140 aa17.02■□□□□ 0.31
CLN5-202ENST00000485938 LGALS1P09382 135 aaKnown RBP17.01■□□□□ 0.31
CLN5-202ENST00000485938 NDUFA4O00483 81 aa17.01■□□□□ 0.31
CLN5-202ENST00000485938 MGPP08493 103 aa17.01■□□□□ 0.31
CLN5-202ENST00000485938 PRSS29PA6NIE9 313 aa16.99■□□□□ 0.31
CLN5-202ENST00000485938 RNASE4P34096 147 aaKnown RBP16.99■□□□□ 0.31
CLN5-202ENST00000485938 AMTNQ6UX39 209 aa16.99■□□□□ 0.31
CLN5-202ENST00000485938 CYSLTR1Q9Y271 337 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms