RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 OR51M1Q9H341 326 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 ZNF492Q9P255 531 aa9.29□□□□□ -0.92
SMARCD3-211ENST00000485592 HMSDA8MTL9 139 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 CRYGDP07320 174 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 SFTA3P0C7M3 94 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 GYPEP15421 78 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 IQCF2Q8IXL9 164 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 KCNRGQ8N5I3 272 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 NTN5Q8WTR8 489 aaPredicted RBP9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
SMARCD3-211ENST00000485592 TRBV7-9A0A0J9YWB2 115 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 C9JCJ5 164 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 J3QL48 77 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 OR7C2O60412 319 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 NBEAP1P0C6P0 100 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 ZNF138P52744 262 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 UBE2L3P68036 154 aaKnown RBP9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 HAMPP81172 84 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 ACOT6Q3I5F7 207 aaPredicted RBP9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 KHDC3LQ587J8 217 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 Q6ZQT7 251 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 TCTE3Q8IZS6 198 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 OR10G4Q8NGN3 311 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 OR10G7Q8NGN6 311 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 ZNF479Q96JC4 524 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 VPS13BQ7Z7G8 4022 aa9.27□□□□□ -0.93
SMARCD3-211ENST00000485592 hCG_2014768A0A024R1R8 64 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 TAAR5O14804 337 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 HMGB3O15347 200 aaKnown RBP9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 SERF2P84101 59 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 MUC21Q5SSG8 566 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 Q8TAT8 98 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 SPXQ9BT56 116 aa9.26□□□□□ -0.93
SMARCD3-211ENST00000485592 TRGV11A0A075B6L2 103 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 BORCS7-ASMTA0A0B4J1R7 106 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 A0A1B0GVG6 124 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 CSN1S1P47710 185 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 CDC34P49427 236 aaPredicted RBP9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 FAM159AQ6UWV7 190 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 RASL10AQ92737 203 aa9.25□□□□□ -0.93
SMARCD3-211ENST00000485592 TRAV4A0A0B4J268 109 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 BCL2L11O43521 198 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 STAG3L2P0CL84 134 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 STAG3L3P0CL85 134 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 ARL14EPLP0DKL9 152 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 PPT1P50897 306 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 TAS2R45P59539 299 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 TMEM183BQ1AE95 376 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 TMEM183AQ8IXX5 376 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 RAB24Q969Q5 203 aa9.24□□□□□ -0.93
SMARCD3-211ENST00000485592 IGHV3-38A0A0C4DH36 116 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 A0A1W2PPV4 95 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 RBAKDNA6NC62 111 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 PQLC2Q6ZP29 291 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 NHLRC2Q8NBF2 726 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 OR4C5Q8NGB2 326 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 SUN5Q8TC36 379 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 BOLA1Q9Y3E2 137 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 MYCBP2O75592 4640 aa9.23□□□□□ -0.93
SMARCD3-211ENST00000485592 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 A0A0D9SG52 128 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 LRCOL1A6NCL2 159 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 MBP02144 154 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 RANP62826 216 aaKnown RBP9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 Q6AWC8 147 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 Q8N814 137 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 NAGKQ9UJ70 344 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 LENEPQ9Y5L5 61 aa9.22□□□□□ -0.93
SMARCD3-211ENST00000485592 C1QBP02746 253 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 GCHFRP30047 84 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 FHITP49789 147 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 TIRAPP58753 221 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 LGALSLQ3ZCW2 172 aaPredicted RBP9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 LINC01556Q5JQF7 62 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 TMUB2Q71RG4 321 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 Q9HAA7 133 aa9.21□□□□□ -0.94
SMARCD3-211ENST00000485592 TRAV8-6A0A0B4J262 113 aa9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 IBA57-AS1B1ANH7 110 aa9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 M0R2P5 195 aa9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 PLA2G1BP04054 148 aaKnown RBP9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 AKAP14Q86UN6 197 aa9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 ACTR3CQ9C0K3 210 aaPredicted RBP9.2□□□□□ -0.94
SMARCD3-211ENST00000485592 CTXND1A0A1B0GTU2 59 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 KANTRA0A1W2PQU2 76 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 GGTLC3B5MD39 225 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 SEC11BP0C7V7 166 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 OR10J3Q5JRS4 329 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 STOML3Q8TAV4 291 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 ZNF471Q9BX82 626 aaPredicted RBP9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 OTORQ9NRC9 128 aa9.19□□□□□ -0.94
SMARCD3-211ENST00000485592 DIRC3C9JPN6 131 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 CXorf1O96002 111 aa9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 PFN1P07737 140 aaKnown RBP9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 GATA1P15976 413 aaPredicted RBP9.18□□□□□ -0.94
SMARCD3-211ENST00000485592 GNG5P63218 68 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms