RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TEX261Q6UWH6 196 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 NEGR1Q7Z3B1 354 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 C12orf45Q8N5I9 185 aaPredicted RBP4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 C11orf72Q8NBR9 251 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 ZNF680Q8NEM1 530 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 ARV1Q9H2C2 271 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 PRO0255Q9UI72 69 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 RNF24Q9Y225 148 aa4.02□□□□□ -1.77
SEMA3D-204ENST00000484038 E5RGE8 158 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 MRPS12O15235 138 aaKnown RBP4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 ARPC5O15511 151 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 CRYGDP07320 174 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 CRYBA4P53673 196 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 SELENOTP62341 195 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 SLC38A11Q08AI6 406 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 PPP1R1AQ13522 171 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 MRPL23Q16540 153 aaKnown RBP4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 PATE2Q6UY27 113 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 LINC00305Q7Z4B0 112 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 BPIFA4PQ86YQ2 179 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 SUN5Q8TC36 379 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 SLC25A21Q9BQT8 299 aaPredicted RBP4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 SDF2L1Q9HCN8 221 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 HHLA3Q9XRX5 114 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 KLF12Q9Y4X4 402 aa4.01□□□□□ -1.77
SEMA3D-204ENST00000484038 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 C9orf170A2RU37 121 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 C7orf71A4D174 169 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 K7EP13 123 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 SSSCA1O60232 199 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 COX7A2P2O60397 106 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 SPINK4O60575 86 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 SLC25A5P05141 298 aaKnown RBP4□□□□□ -1.77
SEMA3D-204ENST00000484038 SLC25A6P12236 298 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 SRIP30626 198 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 TCL1AP56279 114 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 ZNF415Q09FC8 603 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 BTN1A1Q13410 526 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 LRRC37A5PQ49AS3 106 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 TMUB2Q71RG4 321 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 C10orf126Q8N4M7 172 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 EIF4E3Q8N5X7 224 aaKnown RBP4□□□□□ -1.77
SEMA3D-204ENST00000484038 Q8N814 137 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 ODF3Q96PU9 254 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 VGLL1Q99990 258 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 PSENENQ9NZ42 101 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 PXMP4Q9Y6I8 212 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 LINC00862A6NCI5 91 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 LRCOL1A6NCL2 159 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 H3BQ15 152 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 K7EQD1 137 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 IFNA7P01567 189 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 METTL15P1P0C7V9 234 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 IGLC2P0DOY2 106 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 RNASE4P34096 147 aaKnown RBP4□□□□□ -1.77
SEMA3D-204ENST00000484038 POLR2GP62487 172 aaKnown RBP eCLIP4□□□□□ -1.77
SEMA3D-204ENST00000484038 ERCC8Q13216 396 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 SLAQ13239 276 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 TMEM128Q5BJH2 165 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 ZNF546Q86UE3 836 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 COMMD7Q86VX2 200 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 LRTM2Q8N967 370 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 Q9HAA7 133 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 NPVFQ9HCQ7 196 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
SEMA3D-204ENST00000484038 RCL1Q9Y2P8 373 aaKnown RBP4□□□□□ -1.77
SEMA3D-204ENST00000484038 HMCN2Q8NDA2 5059 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 C5orf51A6NDU8 294 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 HMSDA8MTL9 139 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 KLLNB2CW77 178 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 TEX46H3BTG2 121 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 M0R3E3 92 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 AGPAT2O15120 278 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 MPDU1O75352 247 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 SFTA3P0C7M3 94 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 S100A11P31949 105 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 CLLU1Q5K131 121 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 IBA57Q5T440 356 aaKnown RBP3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 C10orf113Q5VZT2 155 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 ALKAL2Q6UX46 152 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 SMIM29Q86T20 159 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 OR10P1Q8NGE3 313 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 MITD1Q8WV92 249 aa3.99□□□□□ -1.77
SEMA3D-204ENST00000484038 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 IGHV3-38A0A0C4DH36 116 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 K7EPK0 472 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 SFT2D2O95562 160 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 GPX1P07203 203 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 PPT1P50897 306 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 RAB14P61106 215 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 GUK1Q16774 197 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 PPP1R1CQ8WVI7 109 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 TMEM37Q8WXS4 190 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 SAT2Q96F10 170 aaPredicted RBP3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 TXNDC17Q9BRA2 123 aa3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 MRPL32Q9BYC8 188 aaKnown RBP3.98□□□□□ -1.77
SEMA3D-204ENST00000484038 IGHV1OR15-1A0A075B7D0 117 aa3.97□□□□□ -1.77
SEMA3D-204ENST00000484038 C9JCJ5 164 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms