RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 CRIP1P50238 77 aa8.61□□□□□ -1.03
SHANK1-208ENST00000483981 LGALS9BQ3B8N2 356 aa8.61□□□□□ -1.03
SHANK1-208ENST00000483981 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
SHANK1-208ENST00000483981 FAM159AQ6UWV7 190 aa8.61□□□□□ -1.03
SHANK1-208ENST00000483981 Q86TA4 180 aa8.61□□□□□ -1.03
SHANK1-208ENST00000483981 NDFIP1Q9BT67 221 aa8.61□□□□□ -1.03
SHANK1-208ENST00000483981 GCGP01275 180 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 TYMSP04818 313 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 NKX2-5P52952 324 aaPredicted RBP8.6□□□□□ -1.03
SHANK1-208ENST00000483981 ZNF415Q09FC8 603 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 TMEM183BQ1AE95 376 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 SMUG1Q53HV7 270 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 ZNF575Q86XF7 245 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 TMEM183AQ8IXX5 376 aa8.6□□□□□ -1.03
SHANK1-208ENST00000483981 KMT2AQ03164 3969 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 TRGV11A0A075B6L2 103 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 F5H768 121 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 LTAP01374 205 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 PPT1P50897 306 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 RASL10AQ92737 203 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 FMC1Q96HJ9 113 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
SHANK1-208ENST00000483981 NAGKQ9UJ70 344 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 ZFP30Q9Y2G7 519 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 BOLA1Q9Y3E2 137 aa8.59□□□□□ -1.03
SHANK1-208ENST00000483981 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 SCO2A0A1W2PP80 73 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 ZC2HC1AQ96GY0 325 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 KCNS1Q96KK3 526 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 SPXQ9BT56 116 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 SDF2L1Q9HCN8 221 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 MUC4Q99102 2169 aa8.58□□□□□ -1.04
SHANK1-208ENST00000483981 FABP5P3A8MUU1 101 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 P0DMU3 169 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 C15orf53Q8NAA6 179 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 C11orf52Q96A22 123 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 VSIG2Q96IQ7 327 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 MLST8Q9BVC4 326 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 MANBALQ9NQG1 85 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 GNG13Q9P2W3 67 aa8.57□□□□□ -1.04
SHANK1-208ENST00000483981 TRGV2A0A075B6R0 118 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 TRAV26-1A0A087WT03 109 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 H3BNG1 76 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 RNASE3P12724 160 aaKnown RBP8.56□□□□□ -1.04
SHANK1-208ENST00000483981 AKR1C3P42330 323 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 UBE2G1P62253 170 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 OR5I1Q13606 314 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 ZNF674Q2M3X9 581 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 ALKAL2Q6UX46 152 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 LYPD6BQ8NI32 183 aa8.56□□□□□ -1.04
SHANK1-208ENST00000483981 M0R2P5 195 aa8.55□□□□□ -1.04
SHANK1-208ENST00000483981 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
SHANK1-208ENST00000483981 FHL2Q14192 279 aa8.55□□□□□ -1.04
SHANK1-208ENST00000483981 DNLZQ5SXM8 178 aa8.55□□□□□ -1.04
SHANK1-208ENST00000483981 PTH2Q96A98 100 aa8.55□□□□□ -1.04
SHANK1-208ENST00000483981 TXNDC17Q9BRA2 123 aa8.55□□□□□ -1.04
SHANK1-208ENST00000483981 NACAE9PAV3 2078 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 A0A0J9YY99 117 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 KRBOX1C9JBD0 128 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 TEX46H3BTG2 121 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 SH2D1AO60880 128 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 RNF212Q495C1 297 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
SHANK1-208ENST00000483981 DNAH6Q9C0G6 4158 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 BCL2P10415 239 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 RPL35P42766 123 aaKnown RBP8.53□□□□□ -1.04
SHANK1-208ENST00000483981 MEF2BQ02080 365 aaPredicted RBP8.53□□□□□ -1.04
SHANK1-208ENST00000483981 FAM162BQ5T6X4 162 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 BAGE2Q86Y30 109 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 NHLRC2Q8NBF2 726 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 ZNF479Q96JC4 524 aa8.53□□□□□ -1.04
SHANK1-208ENST00000483981 A0A096LPF7 62 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 PGPEP1LA6NFU8 196 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 NUDT3O95989 172 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 IGLV2-8P01709 118 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 SFTA3P0C7M3 94 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 CRYBA4P53673 196 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 LINC01559Q495D7 138 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 IL36BQ9NZH7 164 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 VAX2Q9UIW0 290 aa8.52□□□□□ -1.05
SHANK1-208ENST00000483981 TRBV20OR9-2A0A075B6H5 130 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 TRAV4A0A0B4J268 109 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 B4DEV8 164 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 RS1O15537 224 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 PDE6DO43924 150 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 ORM1P02763 201 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 BLOC1S1P78537 153 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 ZNF876PQ49A33 203 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 SCRT2Q9NQ03 307 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 PRO0255Q9UI72 69 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 HHLA3Q9XRX5 114 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
SHANK1-208ENST00000483981 RAB19A4D1S5 217 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 M0R036 132 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms