RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 GNG5P63218 68 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 BTN1A1Q13410 526 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 SAPCD1Q5SSQ6 148 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 Q6ZTC4 211 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 EIF4E3Q8N5X7 224 aaKnown RBP6.35□□□□□ -1.39
COL8A1-207ENST00000483969 CYB561D1Q8N8Q1 229 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 ZNF680Q8NEM1 530 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 Q8TAT8 98 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 HIST1H2BAQ96A08 127 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 TCEAL7Q9BRU2 100 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 ATG101Q9BSB4 218 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 TREM1Q9NP99 234 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 CELA1Q9UNI1 258 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 PSG8Q9UQ74 426 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
COL8A1-207ENST00000483969 IGHV1OR15-1A0A075B7D0 117 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 DEFB131BA0A096LNP1 70 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 CBY3A6NI87 242 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 GGTLC3B5MD39 225 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 SULT1A2P50226 295 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 FLI1Q01543 452 aaPredicted RBP6.34□□□□□ -1.39
COL8A1-207ENST00000483969 ANXA2RQ3ZCQ2 193 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 CST9LP1Q5W188 147 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 FAM159AQ6UWV7 190 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 ZNF767PQ75MW2 155 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 C9orf62Q8N4C0 152 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 RNASE8Q8TDE3 154 aaKnown RBP6.34□□□□□ -1.39
COL8A1-207ENST00000483969 ARL2-SNX15V9GYD0 113 aa6.34□□□□□ -1.39
COL8A1-207ENST00000483969 TRAV8-1A0A0A6YYK1 113 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 TRAV1-1A0A0B4J248 108 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 IGLL5B9A064 214 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 PAGE4O60829 102 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 DEFB130BP0DP73 79 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 DEFB130AP0DP74 79 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 Q6AWC8 147 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 PRNTQ86SH4 94 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 TMEM75Q8N9X5 138 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 SGK494Q96LW2 274 aa6.33□□□□□ -1.4
COL8A1-207ENST00000483969 NOP10Q9NPE3 64 aaKnown RBP6.33□□□□□ -1.4
COL8A1-207ENST00000483969 A0A1B0GV50 99 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 PLAC8L1A1L4L8 177 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 PEX7O00628 323 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 S100A9P06702 114 aaKnown RBP6.32□□□□□ -1.4
COL8A1-207ENST00000483969 DAZ2Q13117 558 aaKnown RBP6.32□□□□□ -1.4
COL8A1-207ENST00000483969 SMUG1Q53HV7 270 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 IBA57Q5T440 356 aaKnown RBP6.32□□□□□ -1.4
COL8A1-207ENST00000483969 PRR9Q5T870 116 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 KCNS1Q96KK3 526 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 FAM210BQ96KR6 192 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 GSN-AS1Q9NRJ2 163 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 ZFP30Q9Y2G7 519 aa6.32□□□□□ -1.4
COL8A1-207ENST00000483969 TRGV11A0A075B6L2 103 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 TRAV34A0A0B4J273 112 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 LCE6AA0A183 80 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 IGLV2-11P01706 119 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 ATP5G1P05496 136 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 HTN3P15516 51 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 ATP5G3P48201 142 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 UBE2G1P62253 170 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 MUC21Q5SSG8 566 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 TVP23CQ96ET8 276 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 FMC1Q96HJ9 113 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 LINC00479Q96M42 142 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 TXNDC17Q9BRA2 123 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 MANBALQ9NQG1 85 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 KLF12Q9Y4X4 402 aa6.31□□□□□ -1.4
COL8A1-207ENST00000483969 IGHV4-4A0A075B6R2 117 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 TRBV6-1A0A0K0K1D8 114 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 FABP5P3A8MUU1 101 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 GAGE7O76087 117 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 GCGP01275 180 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 IFNA1P01562 189 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 GAGE12FP0CL80 117 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 GAGE12GP0CL81 117 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 GAGE12IP0CL82 117 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 TCL1AP56279 114 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 CCL20P78556 96 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 ZNF415Q09FC8 603 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 SPXQ9BT56 116 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 NDUFAF3Q9BU61 184 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 SDF2L1Q9HCN8 221 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 GNG13Q9P2W3 67 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 NAGKQ9UJ70 344 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 APLNQ9ULZ1 77 aa6.3□□□□□ -1.4
COL8A1-207ENST00000483969 TENM3Q9P273 2699 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 TRGV2A0A075B6R0 118 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 F5H768 121 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 LY6G6CO95867 125 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 PFN1P07737 140 aaKnown RBP6.29□□□□□ -1.4
COL8A1-207ENST00000483969 TAGLN2P37802 199 aaKnown RBP6.29□□□□□ -1.4
COL8A1-207ENST00000483969 AKR1C3P42330 323 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 NKX2-5P52952 324 aaPredicted RBP6.29□□□□□ -1.4
COL8A1-207ENST00000483969 TMEM183BQ1AE95 376 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 LGALS9BQ3B8N2 356 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 LGALS9CQ6DKI2 356 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 Q6ZQT7 251 aa6.29□□□□□ -1.4
COL8A1-207ENST00000483969 LINC00612Q8N6U2 182 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms