RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NDUFV3P56181 108 aaKnown RBP9.08□□□□□ -0.96
VTI1A-205ENST00000483122 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 IGFBPL1Q8WX77 278 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 RASL10AQ92737 203 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 ROS1P08922 2347 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 ZGRF1Q86YA3 2104 aa9.08□□□□□ -0.96
VTI1A-205ENST00000483122 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
VTI1A-205ENST00000483122 RPL7P18124 248 aaKnown RBP9.07□□□□□ -0.96
VTI1A-205ENST00000483122 DEFB109BQ30KR1 87 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 LYRM7Q5U5X0 104 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 Q6ZQT7 251 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 FAM110AQ9BQ89 295 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 NCOR2Q9Y618 2525 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 IGHV7-4-1A0A0J9YVY3 117 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 C17orf100A8MU93 164 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 BAALCQ8WXS3 180 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 APC2O95996 2303 aa9.07□□□□□ -0.96
VTI1A-205ENST00000483122 IGLV1-47P01700 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 CFC1BP0CG36 223 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 CFC1P0CG37 223 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 CRIP2P52943 208 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE2EQ4V326 116 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 RNF182Q8N6D2 247 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 FDCSPQ8NFU4 85 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 RAB1BQ9H0U4 201 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE2DQ9UEU5 116 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 TRAV8-2A0A0B4J237 113 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE12JA6NER3 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 BUB1B-PAK6H3BSN5 160 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE7O76087 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE12FP0CL80 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE12GP0CL81 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE12IP0CL82 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 SCGB1C2P0DMR2 95 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 COX7A1P24310 79 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 RPL32P62910 135 aaKnown RBP9.06□□□□□ -0.96
VTI1A-205ENST00000483122 FAM27E3Q08E93 113 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 GAGE4Q13068 117 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 Q6ZS46 218 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 ACACAQ13085 2346 aa9.06□□□□□ -0.96
VTI1A-205ENST00000483122 DMXL2Q8TDJ6 3036 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 MBD3L4A6NDZ8 208 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-205ENST00000483122 MBD3L3A6NE82 208 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-205ENST00000483122 MBD3L5A6NJ08 208 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-205ENST00000483122 MBD3L2Q8NHZ7 208 aaPredicted RBP9.05□□□□□ -0.96
VTI1A-205ENST00000483122 FANCD2OSQ96PS1 177 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 ONECUT1Q9UBC0 465 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 CSMD1Q96PZ7 3565 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 A0A0J9YY99 117 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 SLC25A20O43772 301 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 MFAP4P55083 255 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 C3orf36Q3SXR2 165 aa9.05□□□□□ -0.96
VTI1A-205ENST00000483122 TRPT1Q86TN4 253 aaKnown RBP9.05□□□□□ -0.96
VTI1A-205ENST00000483122 IGHV3-35A0A0C4DH35 117 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 C9JAW5 83 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 SPRY2O43597 315 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 SNCGO76070 127 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 SPANXN1Q5VSR9 72 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 EMP1P54849 157 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 ADIPOQQ15848 244 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 C10orf126Q8N4M7 172 aa9.04□□□□□ -0.96
VTI1A-205ENST00000483122 IGHV3-30P01768 117 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 IGHV3-30-5P0DP03 117 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 ORMDL2Q53FV1 153 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 TTC32Q5I0X7 151 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 C2orf66Q6UXQ4 117 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 RPL39LQ96EH5 51 aaKnown RBP9.03□□□□□ -0.96
VTI1A-205ENST00000483122 IGLV11-55A0A075B6I3 123 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 IFITM1P13164 125 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
VTI1A-205ENST00000483122 C11orf86A6NJI1 115 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 TIMM23O14925 209 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 BRI3O95415 125 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 CRYGDP07320 174 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 FAM159AQ6UWV7 190 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 PRORYQ9H606 182 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 C21orf62Q9NYP8 219 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 IGF2RP11717 2491 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 ASIPP42127 132 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 TSPEAR-AS2P59090 65 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 SUMO2P61956 95 aaKnown RBP9.02□□□□□ -0.97
VTI1A-205ENST00000483122 TMEM95Q3KNT9 176 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 NUP37Q8NFH4 326 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 NTN5Q8WTR8 489 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-205ENST00000483122 RAX2Q96IS3 184 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 PRO1854Q9UHT4 67 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 FAM215AQ9Y5M1 114 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 PKDREJQ9NTG1 2253 aa9.02□□□□□ -0.97
VTI1A-205ENST00000483122 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-205ENST00000483122 IGFL2Q6UWQ7 119 aa9.01□□□□□ -0.97
VTI1A-205ENST00000483122 Q8N1Y9 231 aa9.01□□□□□ -0.97
VTI1A-205ENST00000483122 RNF223E7ERA6 249 aa9.01□□□□□ -0.97
VTI1A-205ENST00000483122 SLC50A1Q9BRV3 221 aa9.01□□□□□ -0.97
VTI1A-205ENST00000483122 IGLV4-69A0A075B6H9 119 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 IGHV4-4A0A075B6R2 117 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 TRAV17A0A0B4J275 112 aa9□□□□□ -0.97
VTI1A-205ENST00000483122 IGHV3-66A0A0C4DH42 116 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms