RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 TRAV12-3A0A0B4J271 114 aa7.09□□□□□ -1.27
CALD1-220ENST00000482470 TRAV21A0A0B4J279 112 aa7.09□□□□□ -1.27
CALD1-220ENST00000482470 B4DSR2 109 aa7.09□□□□□ -1.27
CALD1-220ENST00000482470 TRBV12-3P01733 135 aa7.09□□□□□ -1.27
CALD1-220ENST00000482470 ZNF56Q15929 161 aa7.09□□□□□ -1.27
CALD1-220ENST00000482470 SCGB3A1Q96QR1 104 aa7.09□□□□□ -1.27
CALD1-220ENST00000482470 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.274e-6■■■■□ 19.6
CALD1-220ENST00000482470 PRRC2AP48634 2157 aaKnown RBP7.09□□□□□ -1.27
CALD1-220ENST00000482470 DYNLRB2Q8TF09 96 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 NXT2Q9NPJ8 142 aaKnown RBP7.08□□□□□ -1.28
CALD1-220ENST00000482470 JMJD1CQ15652 2540 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 TRAV26-1A0A087WT03 109 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 RNF223E7ERA6 249 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 J3QR89 54 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 IGLV2-11P01706 119 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 SCGB1C2P0DMR2 95 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 C11orf71Q6IPW1 123 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 H3BUT2 72 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 SNRPD3P62318 126 aaKnown RBP7.08□□□□□ -1.28
CALD1-220ENST00000482470 ZNF747Q9BV97 191 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 COL12A1Q99715 3063 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 A0A087WWL8 130 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 A0A1W2PRX2 142 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 UNQ9165/PRO28630Q6UXU0 137 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 C9orf139Q6ZV77 190 aa7.08□□□□□ -1.28
CALD1-220ENST00000482470 BEX4Q9NWD9 120 aaPredicted RBP7.08□□□□□ -1.28
CALD1-220ENST00000482470 FN1P02751 2386 aaKnown RBP7.07□□□□□ -1.28
CALD1-220ENST00000482470 DOPEY1Q5JWR5 2465 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 FSTL3O95633 263 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 EMP1P54849 157 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 SYNJ2BPP57105 145 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 Q1RN00 199 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 NEGR1Q7Z3B1 354 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 OR2K2Q8NGT1 345 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 HIST1H4GQ99525 98 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.07□□□□□ -1.28
CALD1-220ENST00000482470 ZC2HC1BQ5TFG8 222 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 SFTA2Q6UW10 78 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 C5orf56Q8N8D9 126 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 CCDC140Q96MF4 163 aa7.07□□□□□ -1.28
CALD1-220ENST00000482470 A0A1B0GV72 72 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 ATP5LO75964 103 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 IGHV4-59P01825 116 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 JMJD8Q96S16 334 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 MRPS16Q9Y3D3 137 aaKnown RBP7.06□□□□□ -1.28
CALD1-220ENST00000482470 TRAV12-2A0A075B6T6 113 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 FAM223BA6NKX1 122 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 OVOL1O14753 267 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 SRSF1Q07955 248 aaKnown RBP eCLIP7.06□□□□□ -1.286e-8■■■■□ 19.9
CALD1-220ENST00000482470 FAM223AQ8IWN6 122 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 RELNP78509 3460 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 IGHV3-73A0A0B4J1V6 119 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 GNRH2O43555 120 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 ANXA2RQ3ZCQ2 193 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 MS4A6AQ9H2W1 248 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 SMAD5-AS1Q9Y6J3 95 aa7.06□□□□□ -1.28
CALD1-220ENST00000482470 COL27A1Q8IZC6 1860 aaPredicted RBP7.06□□□□□ -1.28
CALD1-220ENST00000482470 OR11H12B2RN74 326 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 IGKCP01834 107 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 AZU1P20160 251 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 CRYBA4P53673 196 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 LAGE3Q14657 143 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 TMEM170BQ5T4T1 132 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 OR11H1Q8NG94 326 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 OR11H2Q8NH07 326 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 KIR2DL4Q99706 377 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 TTTY13Q9BZ97 58 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 DAZ1Q9NQZ3 744 aaKnown RBP7.05□□□□□ -1.28
CALD1-220ENST00000482470 PEF1Q9UBV8 284 aaKnown RBP7.05□□□□□ -1.28
CALD1-220ENST00000482470 LINC00477Q96M19 166 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
CALD1-220ENST00000482470 ANKRD17O75179 2603 aaKnown RBP7.05□□□□□ -1.28
CALD1-220ENST00000482470 DPM2O94777 84 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 IGF1P05019 195 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 USMG5Q96IX5 58 aa7.05□□□□□ -1.28
CALD1-220ENST00000482470 DEFB112Q30KQ8 113 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 SPATA12Q7Z6I5 190 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 H7C2G1 150 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 CKS1BP61024 79 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 Q6ZQT7 251 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 PCP2Q8IVA1 136 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 DUX3Q96PT4 197 aa7.04□□□□□ -1.28
CALD1-220ENST00000482470 TMEM8BA6NDV4 472 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 CD300EQ496F6 205 aaPredicted RBP7.03□□□□□ -1.28
CALD1-220ENST00000482470 AJUBAQ96IF1 538 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 KLK9Q9UKQ9 250 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 FASNP49327 2511 aaKnown RBP7.03□□□□□ -1.28
CALD1-220ENST00000482470 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 FABP2P12104 132 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 PAX2Q02962 417 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 DGAT2L7PQ6IED9 249 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 C10orf105Q8TEF2 133 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 NDUFA4O00483 81 aa7.03□□□□□ -1.28
CALD1-220ENST00000482470 GAS8-AS1O95177 125 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 304.3 ms