RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 OR5AC2Q9NZP5 309 aa7.48□□□□□ -1.21
TTC28-206ENST00000480563 TMEM14CQ9P0S9 112 aa7.48□□□□□ -1.21
TTC28-206ENST00000480563 MBD2Q9UBB5 411 aa7.48□□□□□ -1.21
TTC28-206ENST00000480563 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 PYYP10082 97 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 ZNF138P52744 262 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 PDE6HQ13956 83 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 LINC01620Q4KN68 170 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 OR10J3Q5JRS4 329 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 FAM122CQ6P4D5 195 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 OR4C5Q8NGB2 326 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 SLC39A9Q9NUM3 307 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 BOLA1Q9Y3E2 137 aa7.47□□□□□ -1.21
TTC28-206ENST00000480563 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.46□□□□□ -1.22
TTC28-206ENST00000480563 LECT2O14960 151 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 FGF7P21781 194 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 RPL12P30050 165 aaKnown RBP7.46□□□□□ -1.22
TTC28-206ENST00000480563 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.22
TTC28-206ENST00000480563 TMEM183BQ1AE95 376 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 VWC2Q2TAL6 325 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 TMEM183AQ8IXX5 376 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 OR5C1Q8NGR4 320 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 Q8TAT8 98 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 WDR83OSQ9Y284 106 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 HSPB11Q9Y547 144 aa7.46□□□□□ -1.22
TTC28-206ENST00000480563 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 TRBV7-9A0A0J9YWB2 115 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 C17orf112F2Z3M2 114 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 H0YIZ8 118 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 PFN1P07737 140 aaKnown RBP7.45□□□□□ -1.22
TTC28-206ENST00000480563 ZNF266Q14584 549 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 LAGE3Q14657 143 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 TDRG1Q3Y452 100 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 INO80EQ8NBZ0 244 aaPredicted RBP7.45□□□□□ -1.22
TTC28-206ENST00000480563 ATP5SQ99766 215 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 CHAC1Q9BUX1 264 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
TTC28-206ENST00000480563 TRGV11A0A075B6L2 103 aa7.44□□□□□ -1.22
TTC28-206ENST00000480563 NHLH2Q02577 135 aa7.44□□□□□ -1.22
TTC28-206ENST00000480563 FAM159AQ6UWV7 190 aa7.44□□□□□ -1.22
TTC28-206ENST00000480563 OR2T35Q8NGX2 323 aa7.44□□□□□ -1.22
TTC28-206ENST00000480563 SCGB1C1Q8TD33 95 aa7.44□□□□□ -1.22
TTC28-206ENST00000480563 FXYD6-FXYD2A0A087WZ82 144 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 RBFOX3A6NFN3 312 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 M0R2P5 195 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 NBEAP1P0C6P0 100 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 GATA1P15976 413 aaPredicted RBP7.43□□□□□ -1.22
TTC28-206ENST00000480563 LELP1Q5T871 98 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 CIRBP-AS1Q8TBR5 109 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 BAALCQ8WXS3 180 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 NPCDR1Q9BY65 106 aa7.43□□□□□ -1.22
TTC28-206ENST00000480563 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 GNRH2O43555 120 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 Q6AWC8 147 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 SLC25A29Q8N8R3 303 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 CHAC2Q8WUX2 184 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 AQP10Q96PS8 301 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 SLC25A2Q9BXI2 301 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 SMIM3Q9BZL3 60 aa7.42□□□□□ -1.22
TTC28-206ENST00000480563 WDR61Q9GZS3 305 aaKnown RBP7.42□□□□□ -1.22
TTC28-206ENST00000480563 RBAKDNA6NC62 111 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 RS1O15537 224 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 CSN1S1P47710 185 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 ACOT6Q3I5F7 207 aaPredicted RBP7.41□□□□□ -1.22
TTC28-206ENST00000480563 GCSAMLQ5JQS6 135 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 Q8N3U1 123 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 PRADC1Q9BSG0 188 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 GTSF1LQ9H1H1 148 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 OR51M1Q9H341 326 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 NAGKQ9UJ70 344 aa7.41□□□□□ -1.22
TTC28-206ENST00000480563 BORCS7-ASMTA0A0B4J1R7 106 aa7.4□□□□□ -1.22
TTC28-206ENST00000480563 TRBV6-4A0A1B0GX49 114 aa7.4□□□□□ -1.22
TTC28-206ENST00000480563 FBLL1A6NHQ2 334 aaKnown RBP7.4□□□□□ -1.22
TTC28-206ENST00000480563 IGLV2-8P01709 118 aa7.4□□□□□ -1.22
TTC28-206ENST00000480563 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
TTC28-206ENST00000480563 Q8N976 141 aa7.4□□□□□ -1.22
TTC28-206ENST00000480563 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.22
TTC28-206ENST00000480563 RNF222A6NCQ9 220 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 OR10J4P0C629 311 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 RANP62826 216 aaKnown RBP7.39□□□□□ -1.23
TTC28-206ENST00000480563 RHOHQ15669 191 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 TOR2AQ5JU69 321 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 DAZ4Q86SG3 579 aaKnown RBP7.39□□□□□ -1.23
TTC28-206ENST00000480563 FXYD5Q96DB9 178 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 PHYHIPLQ96FC7 376 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 DAZ3Q9NR90 486 aaKnown RBP7.39□□□□□ -1.23
TTC28-206ENST00000480563 TNFSF18Q9UNG2 199 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 LENEPQ9Y5L5 61 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 COX11Q9Y6N1 276 aa7.39□□□□□ -1.23
TTC28-206ENST00000480563 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
TTC28-206ENST00000480563 IGHV3-73A0A0B4J1V6 119 aa7.38□□□□□ -1.23
TTC28-206ENST00000480563 ARPC5O15511 151 aa7.38□□□□□ -1.23
TTC28-206ENST00000480563 CIDEAO60543 219 aa7.38□□□□□ -1.23
TTC28-206ENST00000480563 HNRNPA3P51991 378 aaKnown RBP7.38□□□□□ -1.23
TTC28-206ENST00000480563 RPL37AP61513 92 aaKnown RBP7.38□□□□□ -1.23
TTC28-206ENST00000480563 FFAR4Q5NUL3 377 aa7.38□□□□□ -1.23
TTC28-206ENST00000480563 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
TTC28-206ENST00000480563 GGTLC3B5MD39 225 aa7.37□□□□□ -1.23
TTC28-206ENST00000480563 DIRC3C9JPN6 131 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms