RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 PLAC8L1A1L4L8 177 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 PMS2P5A8MQ11 134 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 EPM2AB3EWF7 344 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 TMEM250H0YL14 139 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 MBP02144 154 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 S100PP25815 95 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 ARL16Q0P5N6 197 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 ZNF726P1Q15940 193 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 SPANXN5Q5MJ07 72 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 CIB3Q96Q77 187 aaPredicted RBP7.18□□□□□ -1.26
SMURF1-204ENST00000480055 PYGO2Q9BRQ0 406 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 HIGD1AQ9Y241 93 aa7.18□□□□□ -1.26
SMURF1-204ENST00000480055 MYCBP2O75592 4640 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 PHOX2AO14813 284 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 OR5G3P0C626 314 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 RPL7P18124 248 aaKnown RBP7.17□□□□□ -1.26
SMURF1-204ENST00000480055 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 SLC38A11Q08AI6 406 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 ZNF493Q6ZR52 646 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 CYP2G1PQ6ZSU1 146 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 OR8A1Q8NGG7 326 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 MANBALQ9NQG1 85 aa7.17□□□□□ -1.26
SMURF1-204ENST00000480055 FLG2Q5D862 2391 aaPredicted RBP7.16□□□□□ -1.26
SMURF1-204ENST00000480055 CTXND1A0A1B0GTU2 59 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 GAGE12BA1L429 117 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 MAP1LC3B2A6NCE7 125 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 PCP4L1A6NKN8 68 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 H7BYZ3 331 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 HYPMO75409 117 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 GAGE7O76087 117 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 CXCL1P09341 107 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 METTL15P1P0C7V9 234 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 GAGE12FP0CL80 117 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 GAGE12GP0CL81 117 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 GAGE12IP0CL82 117 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 INAFM2P0DMQ5 153 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 BTF3P20290 206 aaKnown RBP7.16□□□□□ -1.26
SMURF1-204ENST00000480055 CDKN1BP46527 198 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 PSG3Q16557 428 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 S100A7AQ86SG5 101 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 TMEM263Q8WUH6 116 aaKnown RBP7.16□□□□□ -1.26
SMURF1-204ENST00000480055 SHANK2-AS3Q9BTD1 123 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 MAP1LC3BQ9GZQ8 125 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 Q9H3A6 140 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 GSN-AS1Q9NRJ2 163 aa7.16□□□□□ -1.26
SMURF1-204ENST00000480055 A0A1W2PPQ1 181 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 SNURFLB1AK76 121 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 H3BP45 60 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 H3BRN7 92 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 RPS10P46783 165 aaKnown RBP7.15□□□□□ -1.26
SMURF1-204ENST00000480055 ESRGQ1W209 222 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 RPUSD4Q96CM3 377 aaKnown RBP7.15□□□□□ -1.26
SMURF1-204ENST00000480055 ZNF586Q9NXT0 402 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 GNG13Q9P2W3 67 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 NAT8Q9UHE5 227 aa7.15□□□□□ -1.26
SMURF1-204ENST00000480055 FAT1Q14517 4588 aa7.15□□□□□ -1.27
SMURF1-204ENST00000480055 A0A1B0GV50 99 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 IFITM10A6NMD0 228 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 ZNF727A8MUV8 499 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 PRSS46E5RG02 174 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 J3KRW8 73 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BKO60814 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BJP06899 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 SNRPCP09234 159 aaKnown RBP7.14□□□□□ -1.27
SMURF1-204ENST00000480055 LINC00869P0C866 280 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BOP23527 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BBP33778 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BDP58876 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BCP62807 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 MEF2BQ02080 365 aaPredicted RBP7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST2H2BEQ16778 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 COA6Q5JTJ3 125 aaKnown RBP7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.14□□□□□ -1.27
SMURF1-204ENST00000480055 RNASE8Q8TDE3 154 aaKnown RBP7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BHQ93079 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 ZNF503Q96F45 646 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BNQ99877 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 HIST1H2BMQ99879 126 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 TXNDC17Q9BRA2 123 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 GGACTQ9BVM4 153 aa7.14□□□□□ -1.27
SMURF1-204ENST00000480055 UBE2L5PA0A1B0GUS4 154 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 MPDU1O75352 247 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
SMURF1-204ENST00000480055 ZNF674Q2M3X9 581 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 OR10P1Q8NGE3 313 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 ACTR3CQ9C0K3 210 aaPredicted RBP7.13□□□□□ -1.27
SMURF1-204ENST00000480055 NIT2Q9NQR4 276 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 SLC39A9Q9NUM3 307 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 RNF24Q9Y225 148 aa7.13□□□□□ -1.27
SMURF1-204ENST00000480055 MRPS16Q9Y3D3 137 aaKnown RBP7.13□□□□□ -1.27
SMURF1-204ENST00000480055 A0A087X0K7 114 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 LINC00587B1AMM8 73 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 C17orf112F2Z3M2 114 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 TYMSP04818 313 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 LINC00315P59091 139 aa7.12□□□□□ -1.27
SMURF1-204ENST00000480055 SELENOTP62341 195 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms