RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CBLN2Q8IUK8 224 aa10.12□□□□□ -0.79
ATG4B-218ENST00000479554 C5orf17Q8NAS9 161 aa10.12□□□□□ -0.79
ATG4B-218ENST00000479554 EPDR1Q9UM22 224 aa10.12□□□□□ -0.79
ATG4B-218ENST00000479554 KIAA1109Q2LD37 5005 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 PRSS29PA6NIE9 313 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 RTL8CO15255 209 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 MT-ND4LP03901 98 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 S100A9P06702 114 aaKnown RBP10.11□□□□□ -0.79
ATG4B-218ENST00000479554 HTN1P15515 57 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-218ENST00000479554 OR10J6PQ8NGY7 276 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 CTDSP1Q9GZU7 261 aa10.11□□□□□ -0.79
ATG4B-218ENST00000479554 DYNC1H1Q14204 4646 aaKnown RBP10.1□□□□□ -0.79
ATG4B-218ENST00000479554 F5H768 121 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 ZNF253O75346 499 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 GNG4P50150 75 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 CMTM2Q8TAZ6 248 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 ATG101Q9BSB4 218 aa10.1□□□□□ -0.79
ATG4B-218ENST00000479554 TIMM8BQ9Y5J9 83 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-218ENST00000479554 TRBV20OR9-2A0A075B6H5 130 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 A0A1B0GVY2 172 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 H7BYZ3 331 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 ATP5G1P05496 136 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 CENPWQ5EE01 88 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 ZNF493Q6ZR52 646 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 Q6ZR54 194 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 TMEM263Q8WUH6 116 aaKnown RBP10.09□□□□□ -0.79
ATG4B-218ENST00000479554 ANAPC16Q96DE5 110 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 AAMDCQ9H7C9 122 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 TMEM242Q9NWH2 141 aa10.09□□□□□ -0.79
ATG4B-218ENST00000479554 DNAH11Q96DT5 4516 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 CBY3A6NI87 242 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 TCRAP04437 139 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 GNG5P63218 68 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 TMEM183BQ1AE95 376 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 GFI1BQ5VTD9 330 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 EXOC3-AS1Q8N2X6 119 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 ARL6IP6Q8N6S5 226 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 C15orf54Q8N8G6 183 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 OCC1Q8TAD7 63 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 RNASE8Q8TDE3 154 aaKnown RBP10.08□□□□□ -0.8
ATG4B-218ENST00000479554 ISOC2Q96AB3 205 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 KLF12Q9Y4X4 402 aa10.08□□□□□ -0.8
ATG4B-218ENST00000479554 PPP1R2P9O14990 202 aa10.07□□□□□ -0.8
ATG4B-218ENST00000479554 NUDT3O95989 172 aa10.07□□□□□ -0.8
ATG4B-218ENST00000479554 FAM3BP58499 235 aaPredicted RBP10.07□□□□□ -0.8
ATG4B-218ENST00000479554 UBE2G1P62253 170 aa10.07□□□□□ -0.8
ATG4B-218ENST00000479554 KIR3DS1Q14943 382 aa10.07□□□□□ -0.8
ATG4B-218ENST00000479554 FMC1Q96HJ9 113 aa10.07□□□□□ -0.8
ATG4B-218ENST00000479554 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
ATG4B-218ENST00000479554 RPH3ALQ9UNE2 315 aa10.07□□□□□ -0.8
ATG4B-218ENST00000479554 NACAE9PAV3 2078 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 SERTM2A0A1B0GWG4 89 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 PGPEP1LA6NFU8 196 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 J3KRW8 73 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 K7EQM0 130 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 LEPP41159 167 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 CSN1S1P47710 185 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 ODF3Q96PU9 254 aa10.06□□□□□ -0.8
ATG4B-218ENST00000479554 TRBV6-1A0A0K0K1D8 114 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 COLCA2A8K830 154 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 NPIPB6E9PJ23 425 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 CT45A10P0DMU9 189 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 BAGE2Q86Y30 109 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 MRPL53Q96EL3 112 aaKnown RBP10.05□□□□□ -0.8
ATG4B-218ENST00000479554 SMIM12Q96EX1 92 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 SFRP2Q96HF1 295 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 LINC00479Q96M42 142 aa10.05□□□□□ -0.8
ATG4B-218ENST00000479554 TRAV34A0A0B4J273 112 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 SNURFLB1AK76 121 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 K7EN84 100 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 GCGP01275 180 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 IGLV2-8P01709 118 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 GOLT1AQ6ZVE7 132 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 TMEM75Q8N9X5 138 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 OR10G8Q8NGN5 311 aa10.04□□□□□ -0.8
ATG4B-218ENST00000479554 TRAV12-3A0A0B4J271 114 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 FBLL1A6NHQ2 334 aaKnown RBP10.03□□□□□ -0.8
ATG4B-218ENST00000479554 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 M0R3E3 92 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 S100PP25815 95 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 CCL18P55774 89 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 YPEL4Q96NS1 127 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 BIN3Q9NQY0 253 aa10.03□□□□□ -0.8
ATG4B-218ENST00000479554 PCLOQ9Y6V0 5065 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 GAGE7O76087 117 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 LTAP01374 205 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 MGST1P10620 155 aaKnown RBP10.02□□□□□ -0.81
ATG4B-218ENST00000479554 ELOBQ15370 118 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 Q86TA4 180 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 LINC00612Q8N6U2 182 aa10.02□□□□□ -0.81
ATG4B-218ENST00000479554 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms