RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 SDF2L1Q9HCN8 221 aa13.4□□□□□ -0.26
RUNX3-204ENST00000479341 TP53TG3Q9ULZ0 132 aa13.4□□□□□ -0.26
RUNX3-204ENST00000479341 CBY3A6NI87 242 aa13.39□□□□□ -0.27
RUNX3-204ENST00000479341 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
RUNX3-204ENST00000479341 LINC01559Q495D7 138 aa13.39□□□□□ -0.27
RUNX3-204ENST00000479341 ZNF493Q6ZR52 646 aa13.39□□□□□ -0.27
RUNX3-204ENST00000479341 ZNF575Q86XF7 245 aa13.39□□□□□ -0.27
RUNX3-204ENST00000479341 RNASE8Q8TDE3 154 aaKnown RBP13.39□□□□□ -0.27
RUNX3-204ENST00000479341 KCNS1Q96KK3 526 aa13.39□□□□□ -0.27
RUNX3-204ENST00000479341 KRBOX1C9JBD0 128 aa13.38□□□□□ -0.27
RUNX3-204ENST00000479341 GNRH2O43555 120 aa13.38□□□□□ -0.27
RUNX3-204ENST00000479341 ORM1P02763 201 aa13.38□□□□□ -0.27
RUNX3-204ENST00000479341 ADCYAP1P18509 176 aa13.38□□□□□ -0.27
RUNX3-204ENST00000479341 TMEM263Q8WUH6 116 aaKnown RBP13.38□□□□□ -0.27
RUNX3-204ENST00000479341 PLAC8L1A1L4L8 177 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 M0R036 132 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 TYMSP04818 313 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 C11orf72Q8NBR9 251 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 NUDT10Q8NFP7 164 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 DAZAP1Q96EP5 407 aaKnown RBP13.37□□□□□ -0.27
RUNX3-204ENST00000479341 NUDT11Q96G61 164 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 C16orf74Q96GX8 76 aa13.37□□□□□ -0.27
RUNX3-204ENST00000479341 HUWE1Q7Z6Z7 4374 aaKnown RBP13.36□□□□□ -0.27
RUNX3-204ENST00000479341 TRGV11A0A075B6L2 103 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 IGHV3-16A0A0C4DH30 117 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 B4DEV8 164 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 F8W036 122 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 NDUFA5Q16718 116 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 IBA57Q5T440 356 aaKnown RBP13.36□□□□□ -0.27
RUNX3-204ENST00000479341 FAM231DQ6ZW35 169 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 SLC7A5P1Q8MH63 180 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 ISOC2Q96AB3 205 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 SEC11CQ9BY50 192 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 RNASE7Q9H1E1 156 aaKnown RBP13.36□□□□□ -0.27
RUNX3-204ENST00000479341 C11orf68Q9H3H3 251 aaKnown RBP13.36□□□□□ -0.27
RUNX3-204ENST00000479341 U3KQK5 164 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
RUNX3-204ENST00000479341 TMEM189A5PLL7 270 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 DEFB4AO15263 64 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 P01737 135 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 RPL19P84098 196 aaKnown RBP13.35□□□□□ -0.27
RUNX3-204ENST00000479341 ADIRFQ15847 76 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 DNLZQ5SXM8 178 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 C10orf91Q5T1B1 145 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 GSN-AS1Q9NRJ2 163 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 MDFICQ9P1T7 246 aa13.35□□□□□ -0.27
RUNX3-204ENST00000479341 TMSB15BA0A087X1C1 80 aa13.34□□□□□ -0.27
RUNX3-204ENST00000479341 CXCL1P09341 107 aa13.34□□□□□ -0.27
RUNX3-204ENST00000479341 OR2D3Q8NGH3 330 aa13.34□□□□□ -0.27
RUNX3-204ENST00000479341 IL17DQ8TAD2 202 aa13.34□□□□□ -0.27
RUNX3-204ENST00000479341 OSTCQ9NRP0 149 aa13.34□□□□□ -0.27
RUNX3-204ENST00000479341 A0A0J9YWU9 116 aa13.33□□□□□ -0.28
RUNX3-204ENST00000479341 TCL1AP56279 114 aa13.33□□□□□ -0.28
RUNX3-204ENST00000479341 ZNF415Q09FC8 603 aa13.33□□□□□ -0.28
RUNX3-204ENST00000479341 PNRC1Q12796 327 aaPredicted RBP13.33□□□□□ -0.28
RUNX3-204ENST00000479341 GRIFINA4D1Z8 144 aa13.32□□□□□ -0.28
RUNX3-204ENST00000479341 RNASE3P12724 160 aaKnown RBP13.32□□□□□ -0.28
RUNX3-204ENST00000479341 EMP1P54849 157 aa13.32□□□□□ -0.28
RUNX3-204ENST00000479341 ERVFC1-1P60608 527 aa13.32□□□□□ -0.28
RUNX3-204ENST00000479341 RPS20P60866 119 aaKnown RBP13.32□□□□□ -0.28
RUNX3-204ENST00000479341 DAZ2Q13117 558 aaKnown RBP13.32□□□□□ -0.28
RUNX3-204ENST00000479341 RPP21Q9H633 154 aaKnown RBP13.32□□□□□ -0.28
RUNX3-204ENST00000479341 CARHSP1Q9Y2V2 147 aaKnown RBP13.32□□□□□ -0.28
RUNX3-204ENST00000479341 SNURFLB1AK76 121 aa13.31□□□□□ -0.28
RUNX3-204ENST00000479341 GATCO43716 136 aaKnown RBP13.31□□□□□ -0.28
RUNX3-204ENST00000479341 ASIPP42127 132 aa13.31□□□□□ -0.28
RUNX3-204ENST00000479341 SFRP2Q96HF1 295 aa13.31□□□□□ -0.28
RUNX3-204ENST00000479341 C9orf85Q96MD7 179 aa13.31□□□□□ -0.28
RUNX3-204ENST00000479341 TIMM8BQ9Y5J9 83 aaPredicted RBP13.31□□□□□ -0.28
RUNX3-204ENST00000479341 OR10G8Q8NGN5 311 aa13.3□□□□□ -0.28
RUNX3-204ENST00000479341 SPXQ9BT56 116 aa13.3□□□□□ -0.28
RUNX3-204ENST00000479341 EDA2RQ9HAV5 297 aa13.3□□□□□ -0.28
RUNX3-204ENST00000479341 NOP10Q9NPE3 64 aaKnown RBP13.3□□□□□ -0.28
RUNX3-204ENST00000479341 IL36BQ9NZH7 164 aa13.3□□□□□ -0.28
RUNX3-204ENST00000479341 DKK2Q9UBU2 259 aa13.3□□□□□ -0.28
RUNX3-204ENST00000479341 S100A4P26447 101 aaKnown RBP13.29□□□□□ -0.28
RUNX3-204ENST00000479341 CT83Q5H943 113 aa13.29□□□□□ -0.28
RUNX3-204ENST00000479341 FAM222AQ5U5X8 452 aa13.29□□□□□ -0.28
RUNX3-204ENST00000479341 C15orf54Q8N8G6 183 aa13.29□□□□□ -0.28
RUNX3-204ENST00000479341 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
RUNX3-204ENST00000479341 V9GYV3 84 aa13.29□□□□□ -0.28
RUNX3-204ENST00000479341 XKRY2A2RUG3 117 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 LYRM9A8MSI8 78 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 SPINK4O60575 86 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 ARMS2P0C7Q2 107 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 SPART-AS1P0CW21 52 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 MED14OSP0DP75 135 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 GZMBP10144 247 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 SCRT2Q9NQ03 307 aa13.28□□□□□ -0.28
RUNX3-204ENST00000479341 H3BVH4 76 aa13.27□□□□□ -0.29
RUNX3-204ENST00000479341 IGLC6P0CF74 106 aa13.27□□□□□ -0.29
RUNX3-204ENST00000479341 LINC00612Q8N6U2 182 aa13.27□□□□□ -0.29
RUNX3-204ENST00000479341 PTH2Q96A98 100 aa13.27□□□□□ -0.29
RUNX3-204ENST00000479341 SSBP4Q9BWG4 385 aaPredicted RBP13.27□□□□□ -0.29
RUNX3-204ENST00000479341 KMT2CQ8NEZ4 4911 aaKnown RBP13.27□□□□□ -0.29
RUNX3-204ENST00000479341 TEX48A0A1B0GUV7 120 aa13.26□□□□□ -0.29
RUNX3-204ENST00000479341 CXorf65A6NEN9 183 aa13.26□□□□□ -0.29
RUNX3-204ENST00000479341 A8MWL6 223 aa13.26□□□□□ -0.29
RUNX3-204ENST00000479341 M0R2P5 195 aa13.26□□□□□ -0.29
RUNX3-204ENST00000479341 SNAI2O43623 268 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms