RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 GAGE10A6NGK3 116 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 C15orf62A8K5M9 175 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 H3BP45 60 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 ZNF207O43670 478 aaKnown RBP4.95□□□□□ -1.62
VCP-205ENST00000479300 NDUFB4O95168 129 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 C8orf88P0DMB2 117 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 EDN2P20800 178 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 CRYBB3P26998 211 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 PRCDQ00LT1 54 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 MPV17L2Q567V2 206 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 UNQ9165/PRO28630Q6UXU0 137 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 STPG3Q8N7X2 389 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 OR1B1Q8NGR6 318 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 GATAD1Q8WUU5 269 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 TMEM14BQ9NUH8 114 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 NAT8BQ9UHF3 227 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 PKHD1P08F94 4074 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
VCP-205ENST00000479300 DNAH6Q9C0G6 4158 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 A0A0G2JRQ6 117 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 K7EP34 96 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 CRXO43186 299 aaPredicted RBP4.94□□□□□ -1.62
VCP-205ENST00000479300 NUDT3O95989 172 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 MT-CO2P00403 227 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 IAPPP10997 89 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 ATP5G3P48201 142 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 RPL11P62913 178 aaKnown RBP4.94□□□□□ -1.62
VCP-205ENST00000479300 C5orf17Q8NAS9 161 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 ZNF114Q8NC26 417 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 TMEM116Q8NCL8 245 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 OVOL2Q9BRP0 275 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 CHRDL1Q9BU40 450 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 NPCDR1Q9BY65 106 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 OSTCQ9NRP0 149 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 CACNG5Q9UF02 275 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 V9GYV3 84 aa4.94□□□□□ -1.62
VCP-205ENST00000479300 DNAH2Q9P225 4427 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 TRBV20OR9-2A0A075B6H5 130 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 IGKV3-7A0A075B6H7 116 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 IGHV3OR16-8A0A075B7F1 116 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 TRAV8-6A0A0B4J262 113 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 MUC21A0A0G2JKD1 596 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 IGHV7-4-1A0A0J9YVY3 117 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 MUC21A0A140T8X8 626 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 C9orf118A6NHY6 69 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 H3BRM9 83 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 K7EIM0 57 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 SPRY2O43597 315 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 MPDU1O75352 247 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 HSBP1O75506 76 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 NXPH3O95157 252 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 CTSGP08311 255 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 SRIP30626 198 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 MFAP2P55001 183 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 SPINK9Q5DT21 86 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 SPANXN5Q5MJ07 72 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 MUC21Q5SSG8 566 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 OCC1Q8TAD7 63 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 C18orf32Q8TCD1 76 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 GRAMD2BQ96HH9 432 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 AP1S3Q96PC3 154 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 SIGMAR1Q99720 223 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 TMEM70Q9BUB7 260 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 RHPN1-AS1Q9BWJ2 59 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 KRTAP4-5Q9BYR2 181 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 TMEM191AQ9H0A3 160 aa4.93□□□□□ -1.62
VCP-205ENST00000479300 HEYLQ9NQ87 328 aaPredicted RBP4.93□□□□□ -1.62
VCP-205ENST00000479300 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.93□□□□□ -1.62
VCP-205ENST00000479300 DNAH17Q9UFH2 4485 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
VCP-205ENST00000479300 A0A0J9YWU9 116 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 C7orf71A4D174 169 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 TMEM189A5PLL7 270 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 A6NDN8 102 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 PMS2P5A8MQ11 134 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 I3L2K1 104 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 M0R2Z0 102 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 CHEK1O14757 476 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 CXorf1O96002 111 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 IGKV1-39P01597 117 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 IGHV3-48P01763 117 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 APCSP02743 223 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 IGKV1D-39P04432 117 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 STAG3L2P0CL84 134 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 STAG3L3P0CL85 134 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 RPL35AP18077 110 aaKnown RBP4.92□□□□□ -1.62
VCP-205ENST00000479300 NTF3P20783 257 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 FCGR2BP31994 310 aaPredicted RBP4.92□□□□□ -1.62
VCP-205ENST00000479300 OPRK1P41145 380 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 EBLN2Q6P2I7 272 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 CEMP1Q6PRD7 247 aaPredicted RBP4.92□□□□□ -1.62
VCP-205ENST00000479300 Q6ZRM9 215 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 WFDC3Q8IUB2 231 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 OR8I2Q8N0Y5 310 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 KIR2DL5BQ8NHK3 375 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 DERL1Q9BUN8 251 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 SCRT2Q9NQ03 307 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 TP53TG1Q9Y2A0 90 aa4.92□□□□□ -1.62
VCP-205ENST00000479300 IGHV3-49A0A0A0MS15 119 aa4.91□□□□□ -1.62
VCP-205ENST00000479300 SERTM2A0A1B0GWG4 89 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms