RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	PCNP	Q8WW12	178 aa	Known RBP	12.81	□□□□□ -0.36
RFK-204	ENST00000479197	SDF2L1	Q9HCN8	221 aa		12.81	□□□□□ -0.36
RFK-204	ENST00000479197	MED9	Q9NWA0	146 aa		12.81	□□□□□ -0.36
RFK-204	ENST00000479197	FABP5P3	A8MUU1	101 aa		12.8	□□□□□ -0.36
RFK-204	ENST00000479197	DEFB130B	P0DP73	79 aa		12.8	□□□□□ -0.36
RFK-204	ENST00000479197	DEFB130A	P0DP74	79 aa		12.8	□□□□□ -0.36
RFK-204	ENST00000479197	ZNF506	Q5JVG8	444 aa		12.8	□□□□□ -0.36
RFK-204	ENST00000479197	NHLRC2	Q8NBF2	726 aa		12.8	□□□□□ -0.36
RFK-204	ENST00000479197	C11orf21	Q9P2W6	132 aa		12.8	□□□□□ -0.36
RFK-204	ENST00000479197	TRAV10	A0A0B4J240	114 aa		12.79	□□□□□ -0.36
RFK-204	ENST00000479197	TYMS	P04818	313 aa		12.79	□□□□□ -0.36
RFK-204	ENST00000479197	CRIP1	P50238	77 aa		12.79	□□□□□ -0.36
RFK-204	ENST00000479197	TOR2A	Q5JU69	321 aa		12.79	□□□□□ -0.36
RFK-204	ENST00000479197	FAM162B	Q5T6X4	162 aa		12.79	□□□□□ -0.36
RFK-204	ENST00000479197	FAM210A	Q96ND0	272 aa		12.79	□□□□□ -0.36
RFK-204	ENST00000479197	GNRH2	O43555	120 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	CENPW	Q5EE01	88 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	MLST8	Q9BVC4	326 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	EIF5A2	Q9GZV4	153 aa	Known RBP	12.78	□□□□□ -0.36
RFK-204	ENST00000479197	MDFIC	Q9P1T7	246 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	PLEC	Q15149	4684 aa	Known RBP	12.78	□□□□□ -0.36
RFK-204	ENST00000479197	DEFB131B	A0A096LNP1	70 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	SH2D1A	O60880	128 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	ZNF674	Q2M3X9	581 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	LINC00612	Q8N6U2	182 aa		12.78	□□□□□ -0.36
RFK-204	ENST00000479197	KLK5	Q9Y337	293 aa	Predicted RBP	12.78	□□□□□ -0.36
RFK-204	ENST00000479197	TENM2	Q9NT68	2774 aa		12.77	□□□□□ -0.36
RFK-204	ENST00000479197	IGHV3-16	A0A0C4DH30	117 aa		12.77	□□□□□ -0.37
RFK-204	ENST00000479197	TMEM250	H0YL14	139 aa		12.77	□□□□□ -0.37
RFK-204	ENST00000479197	IGKV3D-20	A0A0C4DH25	116 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	GAGE12B	A1L429	117 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	RAB19	A4D1S5	217 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	SPINK4	O60575	86 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	GAGE7	O76087	117 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	GAGE12F	P0CL80	117 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	GAGE12G	P0CL81	117 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	GAGE12I	P0CL82	117 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	GNG4	P50150	75 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197		Q6ZTI0	123 aa		12.76	□□□□□ -0.37
RFK-204	ENST00000479197	TRGV1	A0A0A0MS02	117 aa		12.75	□□□□□ -0.37
RFK-204	ENST00000479197	ORM1	P02763	201 aa		12.75	□□□□□ -0.37
RFK-204	ENST00000479197	LGALS9B	Q3B8N2	356 aa		12.75	□□□□□ -0.37
RFK-204	ENST00000479197	SMIM12	Q96EX1	92 aa		12.75	□□□□□ -0.37
RFK-204	ENST00000479197	SPX	Q9BT56	116 aa		12.75	□□□□□ -0.37
RFK-204	ENST00000479197	TRBV20OR9-2	A0A075B6H5	130 aa		12.74	□□□□□ -0.37
RFK-204	ENST00000479197		B4DEV8	164 aa		12.74	□□□□□ -0.37
RFK-204	ENST00000479197	NDUFS6	O75380	124 aa	Known RBP	12.74	□□□□□ -0.37
RFK-204	ENST00000479197	HTN3	P15516	51 aa		12.74	□□□□□ -0.37
RFK-204	ENST00000479197		M0R036	132 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	IGLV2-8	P01709	118 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	ATP5G1	P05496	136 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	RAB14	P61106	215 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	LINC01559	Q495D7	138 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	PRR27	Q6MZM9	219 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	PARL	Q9H300	379 aa		12.73	□□□□□ -0.37
RFK-204	ENST00000479197	MRPL16	Q9NX20	251 aa	Known RBP	12.73	□□□□□ -0.37
RFK-204	ENST00000479197	TRGV2	A0A075B6R0	118 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197	KRBOX1	C9JBD0	128 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197	IGLL5	B9A064	214 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197		C9JCJ5	164 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197		M0R2P5	195 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197	MGST1	P10620	155 aa	Known RBP	12.72	□□□□□ -0.37
RFK-204	ENST00000479197	CEBPG	P53567	150 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197	C18orf15	Q96N68	181 aa		12.72	□□□□□ -0.37
RFK-204	ENST00000479197	PGPEP1L	A6NFU8	196 aa		12.71	□□□□□ -0.38
RFK-204	ENST00000479197	S100A4	P26447	101 aa	Known RBP	12.71	□□□□□ -0.38
RFK-204	ENST00000479197	ASIP	P42127	132 aa		12.71	□□□□□ -0.38
RFK-204	ENST00000479197	IFITM2	Q01629	132 aa		12.71	□□□□□ -0.38
RFK-204	ENST00000479197	RASL10A	Q92737	203 aa		12.71	□□□□□ -0.38
RFK-204	ENST00000479197	C9orf85	Q96MD7	179 aa		12.71	□□□□□ -0.38
RFK-204	ENST00000479197	SRP19	P09132	144 aa	Known RBP	12.7	□□□□□ -0.38
RFK-204	ENST00000479197	RNASE3	P12724	160 aa	Known RBP	12.7	□□□□□ -0.38
RFK-204	ENST00000479197	OR5I1	Q13606	314 aa		12.7	□□□□□ -0.38
RFK-204	ENST00000479197	MUC4	Q99102	2169 aa		12.69	□□□□□ -0.38
RFK-204	ENST00000479197	KMT2C	Q8NEZ4	4911 aa	Known RBP	12.69	□□□□□ -0.38
RFK-204	ENST00000479197	IGHV4-4	A0A075B6R2	117 aa		12.69	□□□□□ -0.38
RFK-204	ENST00000479197	TMSB15B	A0A087X1C1	80 aa		12.69	□□□□□ -0.38
RFK-204	ENST00000479197		F5H768	121 aa		12.69	□□□□□ -0.38
RFK-204	ENST00000479197	TCTA	P57738	103 aa		12.69	□□□□□ -0.38
RFK-204	ENST00000479197	BIN3	Q9NQY0	253 aa		12.69	□□□□□ -0.38
RFK-204	ENST00000479197	PEA15	Q15121	130 aa		12.68	□□□□□ -0.38
RFK-204	ENST00000479197	DNLZ	Q5SXM8	178 aa		12.68	□□□□□ -0.38
RFK-204	ENST00000479197	FAM210B	Q96KR6	192 aa		12.68	□□□□□ -0.38
RFK-204	ENST00000479197	IL36B	Q9NZH7	164 aa		12.68	□□□□□ -0.38
RFK-204	ENST00000479197	GRIFIN	A4D1Z8	144 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197		H3BVH4	76 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	RPL19	P84098	196 aa	Known RBP	12.67	□□□□□ -0.38
RFK-204	ENST00000479197	CLLU1	Q5K131	121 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	ZNF575	Q86XF7	245 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	DAZAP1	Q96EP5	407 aa	Known RBP	12.67	□□□□□ -0.38
RFK-204	ENST00000479197	SMIM7	Q9BQ49	75 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	SMDT1	Q9H4I9	107 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	LYST	Q99698	3801 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	C19orf71	A6NCJ1	209 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	SRSF3	P84103	164 aa	Known RBP	12.67	□□□□□ -0.38
RFK-204	ENST00000479197	TMEM88	Q6PEY1	159 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	OCC1	Q8TAD7	63 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197	NDUFAF3	Q9BU61	184 aa		12.67	□□□□□ -0.38
RFK-204	ENST00000479197		K7EN84	100 aa		12.66	□□□□□ -0.38
RFK-204	ENST00000479197	CXCL1	P09341	107 aa		12.66	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms