RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 BTF3P20290 206 aaKnown RBP16.15■□□□□ 0.18
C9orf3-215ENST00000478473 NDFIP1Q9BT67 221 aa16.15■□□□□ 0.18
C9orf3-215ENST00000478473 HHLA3Q9XRX5 114 aa16.15■□□□□ 0.18
C9orf3-215ENST00000478473 TTC32Q5I0X7 151 aa16.14■□□□□ 0.17
C9orf3-215ENST00000478473 CYB561D1Q8N8Q1 229 aa16.14■□□□□ 0.17
C9orf3-215ENST00000478473 TMEM75Q8N9X5 138 aa16.14■□□□□ 0.17
C9orf3-215ENST00000478473 PSG8Q9UQ74 426 aa16.14■□□□□ 0.17
C9orf3-215ENST00000478473 F6UZH7 168 aa16.13■□□□□ 0.17
C9orf3-215ENST00000478473 GNRH2O43555 120 aa16.13■□□□□ 0.17
C9orf3-215ENST00000478473 IGHV3-53P01767 116 aa16.13■□□□□ 0.17
C9orf3-215ENST00000478473 TYMSP04818 313 aa16.13■□□□□ 0.17
C9orf3-215ENST00000478473 FLI1Q01543 452 aaPredicted RBP16.13■□□□□ 0.17
C9orf3-215ENST00000478473 ICOSQ9Y6W8 199 aa16.13■□□□□ 0.17
C9orf3-215ENST00000478473 KIAA1109Q2LD37 5005 aa16.13■□□□□ 0.17
C9orf3-215ENST00000478473 M0R2P5 195 aa16.12■□□□□ 0.17
C9orf3-215ENST00000478473 ARPC5O15511 151 aa16.12■□□□□ 0.17
C9orf3-215ENST00000478473 ZNF80P51504 273 aaPredicted RBP16.12■□□□□ 0.17
C9orf3-215ENST00000478473 KRTAP1-5Q9BYS1 174 aa16.12■□□□□ 0.17
C9orf3-215ENST00000478473 SDF2L1Q9HCN8 221 aa16.12■□□□□ 0.17
C9orf3-215ENST00000478473 ZNF345Q14585 488 aa16.11■□□□□ 0.17
C9orf3-215ENST00000478473 ZNF479Q96JC4 524 aa16.11■□□□□ 0.17
C9orf3-215ENST00000478473 SGK494Q96LW2 274 aa16.11■□□□□ 0.17
C9orf3-215ENST00000478473 NKX6-2Q9C056 277 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-215ENST00000478473 C11orf21Q9P2W6 132 aa16.11■□□□□ 0.17
C9orf3-215ENST00000478473 NAGKQ9UJ70 344 aa16.11■□□□□ 0.17
C9orf3-215ENST00000478473 TRAV4A0A0B4J268 109 aa16.1■□□□□ 0.17
C9orf3-215ENST00000478473 MRPL23Q16540 153 aaKnown RBP16.1■□□□□ 0.17
C9orf3-215ENST00000478473 SAPCD1Q5SSQ6 148 aa16.1■□□□□ 0.17
C9orf3-215ENST00000478473 C8orf49Q96NF6 230 aa16.1■□□□□ 0.17
C9orf3-215ENST00000478473 PFN1P07737 140 aaKnown RBP16.09■□□□□ 0.17
C9orf3-215ENST00000478473 AKR1C8PQ5T2L2 129 aa16.09■□□□□ 0.17
C9orf3-215ENST00000478473 KCNRGQ8N5I3 272 aa16.09■□□□□ 0.17
C9orf3-215ENST00000478473 PTH2Q96A98 100 aa16.09■□□□□ 0.17
C9orf3-215ENST00000478473 HMSDA8MTL9 139 aa16.08■□□□□ 0.16
C9orf3-215ENST00000478473 GCGP01275 180 aa16.08■□□□□ 0.16
C9orf3-215ENST00000478473 SFTA3P0C7M3 94 aa16.08■□□□□ 0.16
C9orf3-215ENST00000478473 TNP2Q05952 138 aa16.08■□□□□ 0.16
C9orf3-215ENST00000478473 SMUG1Q53HV7 270 aa16.08■□□□□ 0.16
C9orf3-215ENST00000478473 TRGV4A0A0C4DH28 118 aa16.07■□□□□ 0.16
C9orf3-215ENST00000478473 FAM74A7A6NL05 159 aa16.07■□□□□ 0.16
C9orf3-215ENST00000478473 MED14OSP0DP75 135 aa16.07■□□□□ 0.16
C9orf3-215ENST00000478473 ORM1P02763 201 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 LYPD5Q6UWN5 251 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 NEGR1Q7Z3B1 354 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 COX8CQ7Z4L0 72 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 PRNTQ86SH4 94 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 HIST1H2BAQ96A08 127 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 C9orf85Q96MD7 179 aa16.06■□□□□ 0.16
C9orf3-215ENST00000478473 SMLR1H3BR10 107 aa16.05■□□□□ 0.16
C9orf3-215ENST00000478473 K7EQD1 137 aa16.05■□□□□ 0.16
C9orf3-215ENST00000478473 CIDEAO60543 219 aa16.05■□□□□ 0.16
C9orf3-215ENST00000478473 ZFP69Q49AA0 526 aa16.05■□□□□ 0.16
C9orf3-215ENST00000478473 LINC00479Q96M42 142 aa16.05■□□□□ 0.16
C9orf3-215ENST00000478473 MAP1LC3B2A6NCE7 125 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 SIVA1O15304 175 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 FHITP49789 147 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 OR4C5Q8NGB2 326 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 OR11H4Q8NGC9 324 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 TCEAL7Q9BRU2 100 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 MAP1LC3BQ9GZQ8 125 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 ARL2-SNX15V9GYD0 113 aa16.04■□□□□ 0.16
C9orf3-215ENST00000478473 PEX7O00628 323 aa16.03■□□□□ 0.16
C9orf3-215ENST00000478473 SEC11BP0C7V7 166 aa16.03■□□□□ 0.16
C9orf3-215ENST00000478473 PPT1P50897 306 aa16.03■□□□□ 0.16
C9orf3-215ENST00000478473 FGF8P55075 233 aaPredicted RBP16.03■□□□□ 0.16
C9orf3-215ENST00000478473 NXPH4O95158 308 aa16.02■□□□□ 0.16
C9orf3-215ENST00000478473 RNASE3P12724 160 aaKnown RBP16.02■□□□□ 0.16
C9orf3-215ENST00000478473 GATA1P15976 413 aaPredicted RBP16.02■□□□□ 0.16
C9orf3-215ENST00000478473 TRAV34A0A0B4J273 112 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 A0A0D9SG52 128 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 C9JCJ5 164 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 IFNA7P01567 189 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 GYPEP15421 78 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 SRIP30626 198 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 UBE2G2P60604 165 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 ZNF876PQ49A33 203 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 PIK3CD-AS1Q5SR53 167 aa16.01■□□□□ 0.15
C9orf3-215ENST00000478473 IGKV3D-20A0A0C4DH25 116 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 TRBV6-1A0A0K0K1D8 114 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 FABP5P3A8MUU1 101 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 UMAD1C9J7I0 102 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 RS1O15537 224 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 TIRAPP58753 221 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 Q86TA4 180 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 STOML3Q8TAV4 291 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 MBD3L1Q8WWY6 194 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 ZFP30Q9Y2G7 519 aa16■□□□□ 0.15
C9orf3-215ENST00000478473 K7EP13 123 aa15.99■□□□□ 0.15
C9orf3-215ENST00000478473 CFAP126Q5VTH2 177 aa15.99■□□□□ 0.15
C9orf3-215ENST00000478473 DPPA3Q6W0C5 159 aa15.99■□□□□ 0.15
C9orf3-215ENST00000478473 Q6ZRN7 208 aaPredicted RBP15.99■□□□□ 0.15
C9orf3-215ENST00000478473 SH2D6Q7Z4S9 175 aa15.99■□□□□ 0.15
C9orf3-215ENST00000478473 PCNPQ8WW12 178 aaKnown RBP15.99■□□□□ 0.15
C9orf3-215ENST00000478473 TXNDC17Q9BRA2 123 aa15.99■□□□□ 0.15
C9orf3-215ENST00000478473 DNLZQ5SXM8 178 aa15.98■□□□□ 0.15
C9orf3-215ENST00000478473 TRBV6-4A0A1B0GX49 114 aa15.97■□□□□ 0.15
C9orf3-215ENST00000478473 BCL2L11O43521 198 aa15.97■□□□□ 0.15
C9orf3-215ENST00000478473 CRIP1P50238 77 aa15.97■□□□□ 0.15
C9orf3-215ENST00000478473 ZNF575Q86XF7 245 aa15.97■□□□□ 0.15
C9orf3-215ENST00000478473 FMC1Q96HJ9 113 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms