RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 NDFIP1Q9BT67 221 aa9.43□□□□□ -0.9
RCC1-211ENST00000478232 TNFSF18Q9UNG2 199 aa9.43□□□□□ -0.9
RCC1-211ENST00000478232 TRAV9-2A0A087WT02 112 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 TRAV4A0A0B4J268 109 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 SFTA3P0C7M3 94 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 GCHFRP30047 84 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 SRIP30626 198 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 LINC00315P59091 139 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 GNG5P63218 68 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 SPATA12Q7Z6I5 190 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 C5orf17Q8NAS9 161 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 INO80EQ8NBZ0 244 aaPredicted RBP9.42□□□□□ -0.9
RCC1-211ENST00000478232 OR4C5Q8NGB2 326 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 PCNPQ8WW12 178 aaKnown RBP9.42□□□□□ -0.9
RCC1-211ENST00000478232 ACTR3CQ9C0K3 210 aaPredicted RBP9.42□□□□□ -0.9
RCC1-211ENST00000478232 SDF2L1Q9HCN8 221 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 TMEM167BQ9NRX6 74 aa9.42□□□□□ -0.9
RCC1-211ENST00000478232 K7EP13 123 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 K7EQD1 137 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 TAAR5O14804 337 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 CXorf1O96002 111 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 TCRAP04437 139 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 GIPP09681 153 aaPredicted RBP9.41□□□□□ -0.9
RCC1-211ENST00000478232 GYPEP15421 78 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
RCC1-211ENST00000478232 Q5BKY6 102 aa9.41□□□□□ -0.9
RCC1-211ENST00000478232 FBLL1A6NHQ2 334 aaKnown RBP9.4□□□□□ -0.9
RCC1-211ENST00000478232 C9JCJ5 164 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 F6UZH7 168 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 TYMSP04818 313 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 SGK494Q96LW2 274 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 TXNDC17Q9BRA2 123 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 PSG8Q9UQ74 426 aa9.4□□□□□ -0.9
RCC1-211ENST00000478232 BORCS7-ASMTA0A0B4J1R7 106 aa9.39□□□□□ -0.91
RCC1-211ENST00000478232 CIDEAO60543 219 aa9.39□□□□□ -0.91
RCC1-211ENST00000478232 SAPCD1Q5SSQ6 148 aa9.39□□□□□ -0.91
RCC1-211ENST00000478232 Q6ZRN7 208 aaPredicted RBP9.39□□□□□ -0.91
RCC1-211ENST00000478232 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
RCC1-211ENST00000478232 SH3BGRL3Q9H299 93 aa9.39□□□□□ -0.91
RCC1-211ENST00000478232 LY96Q9Y6Y9 160 aa9.39□□□□□ -0.91
RCC1-211ENST00000478232 IGLV2-11P01706 119 aa9.38□□□□□ -0.91
RCC1-211ENST00000478232 EVI2AP22794 236 aa9.38□□□□□ -0.91
RCC1-211ENST00000478232 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
RCC1-211ENST00000478232 FLI1Q01543 452 aaPredicted RBP9.38□□□□□ -0.91
RCC1-211ENST00000478232 ZNF876PQ49A33 203 aa9.38□□□□□ -0.91
RCC1-211ENST00000478232 SMUG1Q53HV7 270 aa9.38□□□□□ -0.91
RCC1-211ENST00000478232 PGPEP1Q9NXJ5 209 aa9.38□□□□□ -0.91
RCC1-211ENST00000478232 A0A1W2PRE2 83 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 EREGO14944 169 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 GCGP01275 180 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 PFN1P07737 140 aaKnown RBP9.37□□□□□ -0.91
RCC1-211ENST00000478232 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
RCC1-211ENST00000478232 ZFP69Q49AA0 526 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 RPL7L1Q6DKI1 246 aaKnown RBP9.37□□□□□ -0.91
RCC1-211ENST00000478232 PRNTQ86SH4 94 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 CYB561D1Q8N8Q1 229 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 TMEM75Q8N9X5 138 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 PTH2Q96A98 100 aa9.37□□□□□ -0.91
RCC1-211ENST00000478232 FXYD6-FXYD2A0A087WZ82 144 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 RNF222A6NCQ9 220 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 GGTLC3B5MD39 225 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 DNAH10OSP0CZ25 163 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 GATA1P15976 413 aaPredicted RBP9.36□□□□□ -0.91
RCC1-211ENST00000478232 TIRAPP58753 221 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 OR2T35Q8NGX2 323 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 C11orf21Q9P2W6 132 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 TNFRSF18Q9Y5U5 241 aa9.36□□□□□ -0.91
RCC1-211ENST00000478232 RS1O15537 224 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 WFDC10BQ8IUB3 73 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 MAPKAPK5-AS1Q8N8E1 139 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 KRTAP4-5Q9BYR2 181 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 NKX6-2Q9C056 277 aaPredicted RBP9.35□□□□□ -0.91
RCC1-211ENST00000478232 MSRB1Q9NZV6 116 aa9.35□□□□□ -0.91
RCC1-211ENST00000478232 LOC100131303A0A0U1RQF7 123 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 CTXND1A0A1B0GTU2 59 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 TRBV6-4A0A1B0GX49 114 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 IFNA7P01567 189 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 PPT1P50897 306 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 ZNF726P1Q15940 193 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 CFAP126Q5VTH2 177 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 NHLRC2Q8NBF2 726 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
RCC1-211ENST00000478232 PCLOQ9Y6V0 5065 aa9.33□□□□□ -0.92
RCC1-211ENST00000478232 AKR1C8PQ5T2L2 129 aa9.33□□□□□ -0.92
RCC1-211ENST00000478232 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
RCC1-211ENST00000478232 SLC25A29Q8N8R3 303 aa9.33□□□□□ -0.92
RCC1-211ENST00000478232 LINC00479Q96M42 142 aa9.33□□□□□ -0.92
RCC1-211ENST00000478232 TRAV34A0A0B4J273 112 aa9.32□□□□□ -0.92
RCC1-211ENST00000478232 PGPEP1LA6NFU8 196 aa9.32□□□□□ -0.92
RCC1-211ENST00000478232 CRYGDP07320 174 aa9.32□□□□□ -0.92
RCC1-211ENST00000478232 RNASE3P12724 160 aaKnown RBP9.32□□□□□ -0.92
RCC1-211ENST00000478232 RHOHQ15669 191 aa9.32□□□□□ -0.92
RCC1-211ENST00000478232 RGS21Q2M5E4 152 aa9.32□□□□□ -0.92
RCC1-211ENST00000478232 CDPF1Q6NVV7 123 aa9.32□□□□□ -0.92
RCC1-211ENST00000478232 DPPA3Q6W0C5 159 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms