RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 IGHV3-23P01764 117 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 LINC01559Q495D7 138 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 NEXN-AS1Q8NBZ9 246 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 HIF1ANQ9NWT6 349 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 DCHS2Q6V1P9 2916 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 C9JAW5 83 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 ELANEP08246 267 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 IL17RELQ6ZVW7 336 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 TNFRSF18Q9Y5U5 241 aa7.57□□□□□ -1.2
COL13A1-207ENST00000478219 PCNX1Q96RV3 2341 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 TRAV12-1A0A0B4J245 112 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 SLC25A20O43772 301 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 IFITM1P13164 125 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 PDE6HQ13956 83 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 PLGLAQ15195 96 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 GFRALQ6UXV0 394 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 PIP4P1Q86T03 277 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 LINC00311Q8N616 119 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 RAX2Q96IS3 184 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 SNCGO76070 127 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 DLX6P56179 175 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 TTC32Q5I0X7 151 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 RNF182Q8N6D2 247 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 ODF3Q96PU9 254 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 VCX2Q9H322 139 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 ONECUT1Q9UBC0 465 aa7.56□□□□□ -1.2
COL13A1-207ENST00000478219 ARHGAP32A7KAX9 2087 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 IGHV3-35A0A0C4DH35 117 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 A0A0J9YY99 117 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 TMEM262E9PQX1 116 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 ZNF883P0CG24 379 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 TSPEAR-AS2P59090 65 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 ZNF672Q499Z4 452 aaPredicted RBP7.55□□□□□ -1.2
COL13A1-207ENST00000478219 SEM1Q6ZVN7 128 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 BAALCQ8WXS3 180 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 IGHV7-4-1A0A0J9YVY3 117 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
COL13A1-207ENST00000478219 ZNF474Q6S9Z5 364 aaPredicted RBP7.55□□□□□ -1.2
COL13A1-207ENST00000478219 RNF152Q8N8N0 203 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
COL13A1-207ENST00000478219 PPDPFQ9H3Y8 114 aa7.55□□□□□ -1.2
COL13A1-207ENST00000478219 TEX49A0A1B0GTD5 131 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 H7C2G1 150 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 IGHV1-8P0DP01 117 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 LOXP28300 417 aaPredicted RBP7.54□□□□□ -1.2
COL13A1-207ENST00000478219 ID1P41134 155 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 Q8N1Y9 231 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 C10orf126Q8N4M7 172 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 IGHV1-3A0A0C4DH29 117 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 IGHV3-30P01768 117 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 IGHV3-30-5P0DP03 117 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 LPAL2Q16609 132 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 RPL39LQ96EH5 51 aaKnown RBP7.54□□□□□ -1.2
COL13A1-207ENST00000478219 SMIM2Q9BVW6 85 aa7.54□□□□□ -1.2
COL13A1-207ENST00000478219 LRBAP50851 2863 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 SCGB2A1O75556 95 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 CRYGDP07320 174 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 CCL17Q92583 94 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 TOMM6Q96B49 74 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 C11orf86A6NJI1 115 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 IGHG3P01860 377 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 MEIG1Q5JSS6 88 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 C14orf178Q8N769 122 aaPredicted RBP7.53□□□□□ -1.2
COL13A1-207ENST00000478219 C15orf53Q8NAA6 179 aa7.53□□□□□ -1.2
COL13A1-207ENST00000478219 ZFHX3Q15911 3703 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 RNF223E7ERA6 249 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 ASIPP42127 132 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 SRSF2Q01130 221 aaKnown RBP7.52□□□□□ -1.21
COL13A1-207ENST00000478219 TMEM155Q4W5P6 130 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 C2orf66Q6UXQ4 117 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 C8orf31Q8N9H6 132 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 CHCHD5Q9BSY4 110 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 PRO1854Q9UHT4 67 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 VPREB3Q9UKI3 123 aa7.52□□□□□ -1.21
COL13A1-207ENST00000478219 ABCA4P78363 2273 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 ASH1LQ9NR48 2969 aaKnown RBP7.51□□□□□ -1.21
COL13A1-207ENST00000478219 IGLV4-69A0A075B6H9 119 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 IGHV3-66A0A0C4DH42 116 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 NDUFB3O43676 98 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 CLEC3BP05452 202 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 LYRM7Q5U5X0 104 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 FANCD2OSQ96PS1 177 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 DUSP14O95147 198 aaKnown RBP7.51□□□□□ -1.21
COL13A1-207ENST00000478219 TSHBP01222 138 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 IGLV1-47P01700 117 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 COX7A1P24310 79 aa7.51□□□□□ -1.21
COL13A1-207ENST00000478219 TECTAO75443 2155 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 IGHV3OR16-13A0A075B7E8 117 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 IGHV3-74A0A0B4J1X5 117 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 RPL7P18124 248 aaKnown RBP7.5□□□□□ -1.21
COL13A1-207ENST00000478219 SPANXN1Q5VSR9 72 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 PIMREGQ9BSJ6 248 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 AGPAT4-IT1Q9H0P7 198 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 TMEM178BH3BS89 294 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 BUB1B-PAK6H3BSN5 160 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 IGHV4-39P01824 125 aa7.5□□□□□ -1.21
COL13A1-207ENST00000478219 SUMO2P61956 95 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms