RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 CLDN22Q8N7P3 220 aa-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 TMEM141Q96I45 108 aa-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 PARVBQ9HBI1 364 aa-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 ENY2Q9NPA8 101 aa-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 COA4Q9NYJ1 87 aa-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 TPRKBQ9Y3C4 175 aa-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 APOBP04114 4563 aaKnown RBP-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 TCOF1Q13428 1488 aaKnown RBP-1.38□□□□□ -2.63
NCKAP1-204ENST00000477988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 A0A0A6YYH2 397 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 ARL5CA6NH57 179 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 A6NJ64 397 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 BBIP1A8MTZ0 92 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 TNFP01375 233 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 CALB1P05937 261 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 CCKP06307 115 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 BCL2P10415 239 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 FABP4P15090 132 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 GCHFRP30047 84 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 ITGB3BPQ13352 177 aaPredicted RBP-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 CCSMST1Q4G0I0 132 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 FKBP1CQ5VVH2 108 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 OR4B1Q8NGF8 309 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 OR5A2Q8NGI9 324 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 OR5AK2Q8NH90 309 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 ATG5Q9H1Y0 275 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 TAF9BQ9HBM6 251 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 C19orf12Q9NSK7 152 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 BET1LQ9NYM9 111 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 NINQ8N4C6 2090 aa-1.39□□□□□ -2.63
NCKAP1-204ENST00000477988 CCDC144AA2RUR9 1427 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 PHIPQ8WWQ0 1821 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 A0A087WUJ7 227 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 TRBV10-1A0A0K0K1A3 114 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 TMEM14DPA8MWL7 114 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 CALUO43852 315 aaPredicted RBP-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 PDE6DO43924 150 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 CST8O60676 142 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 IFNA7P01567 189 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 COX4I1P13073 169 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 IL7P13232 177 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 ERP29P30040 261 aaKnown RBP-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 CAPZBP47756 277 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 TMBIM6P55061 237 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 TAS2R41P59536 307 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 INSL4Q14641 139 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 IQCJQ1A5X6 159 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 CLEC2BQ92478 149 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 VPS29Q9UBQ0 182 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 GUCA1BQ9UMX6 200 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 KDM3BQ7LBC6 1761 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 PLXNB2O15031 1838 aa-1.4□□□□□ -2.63
NCKAP1-204ENST00000477988 ERICH2A1L162 156 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 HSBP1L1C9JCN9 74 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 ZNF670-ZNF695F2Z2N8 137 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 CDC42EP2O14613 210 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 KALRNO60229 2985 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 OR2H2O95918 312 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 TRACP01848 142 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 TRGC2P03986 189 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 IFNA16P05015 189 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 CYBAP13498 195 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 NFYBP25208 207 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 MSMO1Q15800 293 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 PHF5AQ7RTV0 110 aaKnown RBP-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 FAM9CQ8IZT9 166 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 TMEM229BQ8NBD8 167 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 OR8J3Q8NGG0 315 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 PPP1R1CQ8WVI7 109 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 DIRC1Q969H9 104 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 ANKRD11Q6UB99 2663 aaPredicted RBP-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 IFT172Q9UG01 1749 aa-1.41□□□□□ -2.64
NCKAP1-204ENST00000477988 NBEAL2Q6ZNJ1 2754 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 TRBV10-3A0A0K0K1G6 114 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 ATP5HO75947 161 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 DEXIO95424 95 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 ACYP2P14621 99 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 SDC4P31431 198 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 DNAJB13P59910 316 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 HIST1H3AP68431 136 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 RHOHQ15669 191 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 OTUD6BQ8N6M0 293 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 CHMP4BQ9H444 224 aaKnown RBP-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 USE1Q9NZ43 259 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 LRP6O75581 1613 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 PAPPAQ13219 1627 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 DLC1Q96QB1 1528 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 UHRF1BP1Q6BDS2 1440 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 COL6A5A8TX70 2615 aa-1.42□□□□□ -2.64
NCKAP1-204ENST00000477988 WNK3Q9BYP7 1800 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 PTPRMP28827 1452 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 NRXN2Q9P2S2 1712 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 NBASA2RRP1 2371 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 A0A1B0GW64 132 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 I3L2K1 104 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 TPM1P09493 284 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 CCL3L1P16619 93 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 RPL35P42766 123 aaKnown RBP-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 NDUFA6P56556 154 aa-1.43□□□□□ -2.64
NCKAP1-204ENST00000477988 SKP1P63208 163 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms