RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 LYNX1G3V0Z9 82 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 PPP1R17O96001 155 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 LYNX1P0DP58 116 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 TMEM11P17152 192 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 TCTAP57738 103 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 PRB3Q04118 309 aaPredicted RBP10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 Q8NA96 180 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 SMIM2Q9BVW6 85 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 ABCA12Q86UK0 2595 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 CENPVL3A0A0U1RRI6 287 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 TMEM238LA0A1B0GVL6 79 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 A6NJY4 79 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 OR11H12B2RN74 326 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 M0R381 172 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 HLA-DMBP28068 263 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 OR11H1Q8NG94 326 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 OR11H2Q8NH07 326 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 ATP6V0E2Q8NHE4 81 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 AGPAT4-IT1Q9H0P7 198 aa10.41□□□□□ -0.74
HLA-DMA-208ENST00000477541 TRBV7-1A0A0A6YYK4 115 aa10.4□□□□□ -0.74
HLA-DMA-208ENST00000477541 ERCC8Q13216 396 aa10.4□□□□□ -0.74
HLA-DMA-208ENST00000477541 TOMM6Q96B49 74 aa10.4□□□□□ -0.74
HLA-DMA-208ENST00000477541 METTL26Q96S19 204 aa10.4□□□□□ -0.74
HLA-DMA-208ENST00000477541 MYMXA0A1B0GTQ4 84 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 GAGE12HA6NDE8 117 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 PRAC2D3DTV9 90 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 K7ERJ3 54 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 GAS8-AS1O95177 125 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 GAGE13Q4V321 117 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 LYRM7Q5U5X0 104 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 SPANXN1Q5VSR9 72 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 Q8N9W7 124 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 EEF1AKMT3Q96AZ1 226 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 SH3BGRL2Q9UJC5 107 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 U3KQE9 123 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 PKDREJQ9NTG1 2253 aa10.39□□□□□ -0.75
HLA-DMA-208ENST00000477541 C15orf32Q32M92 178 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 UTP20O75691 2785 aaKnown RBP10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 TRGV3P03979 118 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 KLRD1Q13241 179 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 LCNL1Q6ZST4 164 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 TTTY13Q9BZ97 58 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
HLA-DMA-208ENST00000477541 ROS1P08922 2347 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 TRAV8-2A0A0B4J237 113 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 TRBV7-9A0A0J9YWB2 115 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 A0A1B0GV72 72 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 CLPSL1A2RUU4 121 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 IGHV3-23P01764 117 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 AZU1P20160 251 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 RPL32P62910 135 aaKnown RBP10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 MAPKAPK5-AS1Q8N8E1 139 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 NEXN-AS1Q8NBZ9 246 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 FBN2P35556 2912 aa10.37□□□□□ -0.75
HLA-DMA-208ENST00000477541 PRB4P10163 310 aaPredicted RBP10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 LINC00477Q96M19 166 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 VCX2Q9H322 139 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 DPH3P1Q9H4G8 78 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 PRO0461Q9UI25 63 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 ITPR2Q14571 2701 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 IGHV1-69DA0A0B4J2H0 117 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 HOXA3O43365 443 aaPredicted RBP10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 CLEC3BP05452 202 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 SUMO2P61956 95 aaKnown RBP10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 SCGB3A1Q96QR1 104 aa10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
HLA-DMA-208ENST00000477541 PPIFP30405 207 aaKnown RBP10.35□□□□□ -0.75
HLA-DMA-208ENST00000477541 WFDC2Q14508 124 aa10.35□□□□□ -0.75
HLA-DMA-208ENST00000477541 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
HLA-DMA-208ENST00000477541 RP1L1Q8IWN7 2480 aaPredicted RBP10.35□□□□□ -0.75
HLA-DMA-208ENST00000477541 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 OVOL1O14753 267 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 TCTEX1D4Q5JR98 221 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 C11orf71Q6IPW1 123 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 CCDC140Q96MF4 163 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 SPTBN1Q01082 2364 aaKnown RBP10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 C2CD3Q4AC94 2353 aa10.34□□□□□ -0.75
HLA-DMA-208ENST00000477541 H3BMG7 143 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 UBE2E1P51965 193 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 MTURNQ8N3F0 131 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 POM121L12Q8N7R1 296 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 LINC01560Q8TB33 94 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 ITLN2Q8WWU7 325 aaPredicted RBP10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 DLX4Q92988 240 aaPredicted RBP10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 FAM223BA6NKX1 122 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 FAM223AQ8IWN6 122 aa10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 SPAG8Q99932 426 aaPredicted RBP10.33□□□□□ -0.76
HLA-DMA-208ENST00000477541 H3BVH4 76 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 ATP6V0E1O15342 81 aa10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 LGALS1P09382 135 aaKnown RBP10.32□□□□□ -0.76
HLA-DMA-208ENST00000477541 ASIPP42127 132 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms