RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 KLK5Q9Y337 293 aaPredicted RBP9.46□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DAD1P61803 113 aa9.45□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DAZ2Q13117 558 aaKnown RBP9.45□□□□□ -0.9
HLA-DPA1-246ENST00000476642 BAGE2Q86Y30 109 aa9.45□□□□□ -0.9
HLA-DPA1-246ENST00000476642 CLRN3Q8NCR9 226 aa9.45□□□□□ -0.9
HLA-DPA1-246ENST00000476642 EIF5A2Q9GZV4 153 aaKnown RBP9.45□□□□□ -0.9
HLA-DPA1-246ENST00000476642 NAGKQ9UJ70 344 aa9.45□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DYNC2H1Q8NCM8 4307 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TRAV10A0A0B4J240 114 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TMEM250H0YL14 139 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 RPL35P42766 123 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TCL1AP56279 114 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 NANOS2P60321 138 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ZNF506Q5JVG8 444 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 MUC21Q5SSG8 566 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 FAM162BQ5T6X4 162 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 SPXQ9BT56 116 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 BIN3Q9NQY0 253 aa9.44□□□□□ -0.9
HLA-DPA1-246ENST00000476642 RYR2Q92736 4967 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DNAH7Q8WXX0 4024 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 PLAC8L1A1L4L8 177 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 PRM2P04554 102 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 GNG4P50150 75 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 SMDT1Q9H4I9 107 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 NOP10Q9NPE3 64 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 GSN-AS1Q9NRJ2 163 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TP53TG3Q9ULZ0 132 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 CELA1Q9UNI1 258 aa9.43□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ZNF80P51504 273 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TCTAP57738 103 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ZNF674Q2M3X9 581 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 LGALS9BQ3B8N2 356 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 CEMP1Q6PRD7 247 aaPredicted RBP9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 LINC00518Q8N0U6 118 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ZC2HC1AQ96GY0 325 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 MLST8Q9BVC4 326 aa9.42□□□□□ -0.9
HLA-DPA1-246ENST00000476642 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ORM1P02763 201 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DEFB130BP0DP73 79 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DEFB130AP0DP74 79 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 PEA15Q15121 130 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 CENPWQ5EE01 88 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 Q6ZTC4 211 aa9.41□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 TYMSP04818 313 aa9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 ATP5G1P05496 136 aa9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 Q6ZQT7 251 aa9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DAZAP1Q96EP5 407 aaKnown RBP9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 FAM210BQ96KR6 192 aa9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 DERL1Q9BUN8 251 aa9.4□□□□□ -0.9
HLA-DPA1-246ENST00000476642 IGHV3-16A0A0C4DH30 117 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 B4DEV8 164 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 C9JCJ5 164 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SPINK4O60575 86 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SH2D1AO60880 128 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 APOC3P02656 99 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 S100A4P26447 101 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SVBPQ8N300 66 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 LINC00612Q8N6U2 182 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 PCNPQ8WW12 178 aaKnown RBP9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 C18orf15Q96N68 181 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 NDUFAF3Q9BU61 184 aa9.39□□□□□ -0.91
HLA-DPA1-246ENST00000476642 TRGV2A0A075B6R0 118 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 TRGV1A0A0A0MS02 117 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 GAGE12BA1L429 117 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 M0R2P5 195 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 GNRH2O43555 120 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 GAGE7O76087 117 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 GAGE12FP0CL80 117 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 GAGE12GP0CL81 117 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 GAGE12IP0CL82 117 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 MGST1P10620 155 aaKnown RBP9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 ASIPP42127 132 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 CRIP1P50238 77 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 NHLRC2Q8NBF2 726 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 PARLQ9H300 379 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 MDFICQ9P1T7 246 aa9.38□□□□□ -0.91
HLA-DPA1-246ENST00000476642 IGKV3D-20A0A0C4DH25 116 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 CXCL1P09341 107 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 CEBPGP53567 150 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 OR5I1Q13606 314 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 DNLZQ5SXM8 178 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 PRR27Q6MZM9 219 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 RASL10AQ92737 203 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 C11orf21Q9P2W6 132 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
HLA-DPA1-246ENST00000476642 XKRY2A2RUG3 117 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 M0R036 132 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 HTN3P15516 51 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 RPS20P60866 119 aaKnown RBP9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 PIK3CD-AS1Q5SR53 167 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 Q6ZTI0 123 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 PTH2Q96A98 100 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 IL36BQ9NZH7 164 aa9.36□□□□□ -0.91
HLA-DPA1-246ENST00000476642 ZNF727A8MUV8 499 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms