RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 ISOC2Q96AB3 205 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 BTF3L4Q96K17 158 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 LINC00479Q96M42 142 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 CLUHP3Q96NS8 147 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 ODF3Q96PU9 254 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 IMMP2LQ96T52 175 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 RPS10P5Q9NQ39 176 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 OSTCQ9NRP0 149 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 SMCO4Q9NRQ5 59 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 NACAE9PAV3 2078 aa4.67□□□□□ -1.66
CLDN4-205ENST00000476494 IGKV2-40A0A087WW87 121 aaPredicted RBP4.66□□□□□ -1.66
CLDN4-205ENST00000476494 IGKV2D-40P01614 121 aaPredicted RBP4.66□□□□□ -1.66
CLDN4-205ENST00000476494 IGLV2-8P01709 118 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 ZNF688P0C7X2 276 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 MGST1P10620 155 aaKnown RBP4.66□□□□□ -1.66
CLDN4-205ENST00000476494 HLA-DMBP28068 263 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 TSPOP30536 169 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 TFPI2P48307 235 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 ERVFC1-1P60608 527 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 SMUG1Q53HV7 270 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 PSMG4Q5JS54 123 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 OR10G8Q8NGN5 311 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 DAZAP1Q96EP5 407 aaKnown RBP4.66□□□□□ -1.66
CLDN4-205ENST00000476494 SFRP2Q96HF1 295 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 C20orf173Q96LM9 149 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 AGPAT4-IT1Q9H0P7 198 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 SAV1Q9H4B6 383 aaPredicted RBP4.66□□□□□ -1.66
CLDN4-205ENST00000476494 ZNF492Q9P255 531 aa4.66□□□□□ -1.66
CLDN4-205ENST00000476494 TRAV8-1A0A0A6YYK1 113 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 A0A0J9YX75 114 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 FAM231BA6NCW3 169 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 FABP5P3A8MUU1 101 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 PRAC2D3DTV9 90 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 H7BYZ3 331 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 K7EN84 100 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 CRISP2P16562 243 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 S100PP25815 95 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 LEPP41159 167 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 RPL19P84098 196 aaKnown RBP4.65□□□□□ -1.67
CLDN4-205ENST00000476494 HIST1H1AQ02539 215 aaPredicted RBP4.65□□□□□ -1.67
CLDN4-205ENST00000476494 RNF212Q495C1 297 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 CT83Q5H943 113 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 IBA57Q5T440 356 aaKnown RBP4.65□□□□□ -1.67
CLDN4-205ENST00000476494 VGLL1Q99990 258 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 MDFICQ9P1T7 246 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 PKHD1L1Q86WI1 4243 aa4.65□□□□□ -1.67
CLDN4-205ENST00000476494 TRAV9-1A0A075B6T8 112 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 LOC102724200A0A096LPH7 203 aaPredicted RBP4.64□□□□□ -1.67
CLDN4-205ENST00000476494 XKRY2A2RUG3 117 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 C19orf71A6NCJ1 209 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 PGPEP1LA6NFU8 196 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 A8MTW9 85 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 GATCO43716 136 aaKnown RBP4.64□□□□□ -1.67
CLDN4-205ENST00000476494 P01737 135 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 AMBPP02760 352 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 HLA-DRB4P13762 266 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 DEFB131AP59861 70 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 KRTAP10-2P60368 255 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 RPS20P60866 119 aaKnown RBP4.64□□□□□ -1.67
CLDN4-205ENST00000476494 ERCC8Q13216 396 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 DEFB135Q30KP9 77 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 FAM162BQ5T6X4 162 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 C1orf134Q5TEV5 83 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 KCNIP4Q6PIL6 250 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 ATRAIDQ6UW56 229 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 APRG1Q8IVJ8 170 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 C11orf45Q8TAV5 145 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 FAM19A4Q96LR4 140 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 SGK494Q96LW2 274 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 GFRA4Q9GZZ7 299 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 MAP6D1Q9H9H5 199 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 HLA-DRB4X5D2U9 266 aa4.64□□□□□ -1.67
CLDN4-205ENST00000476494 IGHV4-4A0A075B6R2 117 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 TRAV21A0A0B4J279 112 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 ZNF705GA8MUZ8 300 aaPredicted RBP4.63□□□□□ -1.67
CLDN4-205ENST00000476494 A8MWL6 223 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 H3BMM0 161 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 GPX1P07203 203 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 PFN1P07737 140 aaKnown RBP4.63□□□□□ -1.67
CLDN4-205ENST00000476494 NUTF2P61970 127 aaKnown RBP4.63□□□□□ -1.67
CLDN4-205ENST00000476494 BTN1A1Q13410 526 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 OR5I1Q13606 314 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 PRR27Q6MZM9 219 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 FAM24BQ8N5W8 94 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 NHLRC2Q8NBF2 726 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 NUDT10Q8NFP7 164 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 NUDT11Q96G61 164 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 ZC2HC1AQ96GY0 325 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 RPP21Q9H633 154 aaKnown RBP4.63□□□□□ -1.67
CLDN4-205ENST00000476494 IL36BQ9NZH7 164 aa4.63□□□□□ -1.67
CLDN4-205ENST00000476494 IGLV2-18A0A075B6J9 118 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 SMIM27A0A1W2PRY6 76 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 TMEM189A5PLL7 270 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 KLLNB2CW77 178 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 F6UB75 175 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 CXCL1P09341 107 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 P0DMU3 169 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 FAM231AP0DMU4 169 aa4.62□□□□□ -1.67
CLDN4-205ENST00000476494 FAM231CP0DMU5 169 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms