RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 DEFB130AP0DP74 79 aa21.04■□□□□ 0.96
HOXB3-208ENST00000476342 BAGE2Q86Y30 109 aa21.04■□□□□ 0.96
HOXB3-208ENST00000476342 DERL1Q9BUN8 251 aa21.04■□□□□ 0.96
HOXB3-208ENST00000476342 KLK5Q9Y337 293 aaPredicted RBP21.04■□□□□ 0.96
HOXB3-208ENST00000476342 ZNF506Q5JVG8 444 aa21.04■□□□□ 0.96
HOXB3-208ENST00000476342 FAM162BQ5T6X4 162 aa21.02■□□□□ 0.96
HOXB3-208ENST00000476342 NHLRC2Q8NBF2 726 aa21.02■□□□□ 0.96
HOXB3-208ENST00000476342 FAM210AQ96ND0 272 aa21.02■□□□□ 0.96
HOXB3-208ENST00000476342 EIF5A2Q9GZV4 153 aaKnown RBP21.02■□□□□ 0.96
HOXB3-208ENST00000476342 TYMSP04818 313 aa21.01■□□□□ 0.95
HOXB3-208ENST00000476342 TOR2AQ5JU69 321 aa21.01■□□□□ 0.95
HOXB3-208ENST00000476342 PCNPQ8WW12 178 aaKnown RBP21.01■□□□□ 0.95
HOXB3-208ENST00000476342 C11orf21Q9P2W6 132 aa21.01■□□□□ 0.95
HOXB3-208ENST00000476342 DEFB131BA0A096LNP1 70 aa21■□□□□ 0.95
HOXB3-208ENST00000476342 MLST8Q9BVC4 326 aa21■□□□□ 0.95
HOXB3-208ENST00000476342 MDFICQ9P1T7 246 aa21■□□□□ 0.95
HOXB3-208ENST00000476342 GNRH2O43555 120 aa20.99■□□□□ 0.95
HOXB3-208ENST00000476342 ZNF674Q2M3X9 581 aa20.99■□□□□ 0.95
HOXB3-208ENST00000476342 TMEM250H0YL14 139 aa20.98■□□□□ 0.95
HOXB3-208ENST00000476342 SH2D1AO60880 128 aa20.98■□□□□ 0.95
HOXB3-208ENST00000476342 CRIP1P50238 77 aa20.98■□□□□ 0.95
HOXB3-208ENST00000476342 CENPWQ5EE01 88 aa20.98■□□□□ 0.95
HOXB3-208ENST00000476342 LINC00612Q8N6U2 182 aa20.98■□□□□ 0.95
HOXB3-208ENST00000476342 SPXQ9BT56 116 aa20.98■□□□□ 0.95
HOXB3-208ENST00000476342 IGHV3-16A0A0C4DH30 117 aa20.97■□□□□ 0.95
HOXB3-208ENST00000476342 GNG4P50150 75 aa20.97■□□□□ 0.95
HOXB3-208ENST00000476342 SMIM12Q96EX1 92 aa20.97■□□□□ 0.95
HOXB3-208ENST00000476342 TRGV1A0A0A0MS02 117 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 GAGE12BA1L429 117 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 SPINK4O60575 86 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 GAGE7O76087 117 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 ORM1P02763 201 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 GAGE12FP0CL80 117 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 GAGE12GP0CL81 117 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 GAGE12IP0CL82 117 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 LGALS9BQ3B8N2 356 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 Q6ZTI0 123 aa20.96■□□□□ 0.95
HOXB3-208ENST00000476342 NDUFS6O75380 124 aaKnown RBP20.95■□□□□ 0.95
HOXB3-208ENST00000476342 ATP5G1P05496 136 aa20.95■□□□□ 0.95
HOXB3-208ENST00000476342 HTN3P15516 51 aa20.95■□□□□ 0.95
HOXB3-208ENST00000476342 TENM2Q9NT68 2774 aa20.95■□□□□ 0.94
HOXB3-208ENST00000476342 IGKV3D-20A0A0C4DH25 116 aa20.95■□□□□ 0.94
HOXB3-208ENST00000476342 RAB19A4D1S5 217 aa20.95■□□□□ 0.94
HOXB3-208ENST00000476342 B4DEV8 164 aa20.94■□□□□ 0.94
HOXB3-208ENST00000476342 DYNC2H1Q8NCM8 4307 aaKnown RBP20.93■□□□□ 0.94
HOXB3-208ENST00000476342 TRGV2A0A075B6R0 118 aa20.93■□□□□ 0.94
HOXB3-208ENST00000476342 RAB14P61106 215 aa20.93■□□□□ 0.94
HOXB3-208ENST00000476342 PRR27Q6MZM9 219 aa20.93■□□□□ 0.94
HOXB3-208ENST00000476342 IGLL5B9A064 214 aa20.92■□□□□ 0.94
HOXB3-208ENST00000476342 M0R036 132 aa20.92■□□□□ 0.94
HOXB3-208ENST00000476342 LINC01559Q495D7 138 aa20.92■□□□□ 0.94
HOXB3-208ENST00000476342 PARLQ9H300 379 aa20.92■□□□□ 0.94
HOXB3-208ENST00000476342 MRPL16Q9NX20 251 aaKnown RBP20.92■□□□□ 0.94
HOXB3-208ENST00000476342 MGST1P10620 155 aaKnown RBP20.91■□□□□ 0.94
HOXB3-208ENST00000476342 S100A4P26447 101 aaKnown RBP20.91■□□□□ 0.94
HOXB3-208ENST00000476342 C18orf15Q96N68 181 aa20.91■□□□□ 0.94
HOXB3-208ENST00000476342 TRBV20OR9-2A0A075B6H5 130 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 KRBOX1C9JBD0 128 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 M0R2P5 195 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 IGLV2-8P01709 118 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 ASIPP42127 132 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 TCTAP57738 103 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 BIN3Q9NQY0 253 aa20.9■□□□□ 0.94
HOXB3-208ENST00000476342 C9JCJ5 164 aa20.89■□□□□ 0.94
HOXB3-208ENST00000476342 CEBPGP53567 150 aa20.89■□□□□ 0.94
HOXB3-208ENST00000476342 PLECQ15149 4684 aaKnown RBP20.88■□□□□ 0.93
HOXB3-208ENST00000476342 RASL10AQ92737 203 aa20.88■□□□□ 0.93
HOXB3-208ENST00000476342 FAM210BQ96KR6 192 aa20.88■□□□□ 0.93
HOXB3-208ENST00000476342 IGHV4-4A0A075B6R2 117 aa20.87■□□□□ 0.93
HOXB3-208ENST00000476342 F5H768 121 aa20.87■□□□□ 0.93
HOXB3-208ENST00000476342 OR5I1Q13606 314 aa20.87■□□□□ 0.93
HOXB3-208ENST00000476342 C9orf85Q96MD7 179 aa20.87■□□□□ 0.93
HOXB3-208ENST00000476342 PGPEP1LA6NFU8 196 aa20.87■□□□□ 0.93
HOXB3-208ENST00000476342 RNASE3P12724 160 aaKnown RBP20.87■□□□□ 0.93
HOXB3-208ENST00000476342 DAZAP1Q96EP5 407 aaKnown RBP20.87■□□□□ 0.93
HOXB3-208ENST00000476342 SRP19P09132 144 aaKnown RBP20.86■□□□□ 0.93
HOXB3-208ENST00000476342 PEA15Q15121 130 aa20.86■□□□□ 0.93
HOXB3-208ENST00000476342 DNLZQ5SXM8 178 aa20.86■□□□□ 0.93
HOXB3-208ENST00000476342 SMDT1Q9H4I9 107 aa20.86■□□□□ 0.93
HOXB3-208ENST00000476342 TMSB15BA0A087X1C1 80 aa20.85■□□□□ 0.93
HOXB3-208ENST00000476342 NDUFAF3Q9BU61 184 aa20.85■□□□□ 0.93
HOXB3-208ENST00000476342 IL36BQ9NZH7 164 aa20.85■□□□□ 0.93
HOXB3-208ENST00000476342 GRIFINA4D1Z8 144 aa20.83■□□□□ 0.93
HOXB3-208ENST00000476342 IFITM2Q01629 132 aa20.83■□□□□ 0.93
HOXB3-208ENST00000476342 SMIM7Q9BQ49 75 aa20.83■□□□□ 0.93
HOXB3-208ENST00000476342 MUC4Q99102 2169 aa20.82■□□□□ 0.92
HOXB3-208ENST00000476342 H3BVH4 76 aa20.82■□□□□ 0.92
HOXB3-208ENST00000476342 CXCL1P09341 107 aa20.82■□□□□ 0.92
HOXB3-208ENST00000476342 ZNF876PQ49A33 203 aa20.82■□□□□ 0.92
HOXB3-208ENST00000476342 RPL19P84098 196 aaKnown RBP20.81■□□□□ 0.92
HOXB3-208ENST00000476342 CLLU1Q5K131 121 aa20.81■□□□□ 0.92
HOXB3-208ENST00000476342 TMEM88Q6PEY1 159 aa20.81■□□□□ 0.92
HOXB3-208ENST00000476342 C19orf71A6NCJ1 209 aa20.8■□□□□ 0.92
HOXB3-208ENST00000476342 OCC1Q8TAD7 63 aa20.8■□□□□ 0.92
HOXB3-208ENST00000476342 PTH2Q96A98 100 aa20.8■□□□□ 0.92
HOXB3-208ENST00000476342 APLNQ9ULZ1 77 aa20.8■□□□□ 0.92
HOXB3-208ENST00000476342 ZNF727A8MUV8 499 aa20.79■□□□□ 0.92
HOXB3-208ENST00000476342 ARMS2P0C7Q2 107 aa20.79■□□□□ 0.92
HOXB3-208ENST00000476342 LY96Q9Y6Y9 160 aa20.79■□□□□ 0.92
HOXB3-208ENST00000476342 P01737 135 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms