RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 PPP1R1CQ8WVI7 109 aa8.78□□□□□ -1
MRPL55-228ENST00000476267 TRAV8-1A0A0A6YYK1 113 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 TRAV21A0A0B4J279 112 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 IGHV3-38A0A0C4DH36 116 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 PGPA6NDG6 321 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 IBA57-AS1B1ANH7 110 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 TAS2R45P59539 299 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 CYCSP99999 105 aaKnown RBP8.77□□□□□ -1.01
MRPL55-228ENST00000476267 SH2D6Q7Z4S9 175 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 TMEM70Q9BUB7 260 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 NAGKQ9UJ70 344 aa8.77□□□□□ -1.01
MRPL55-228ENST00000476267 F6UZH7 168 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 MPC2O95563 127 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 HAMPP81172 84 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 DPPA3Q6W0C5 159 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 SLC25A29Q8N8R3 303 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 ENKURQ8TC29 256 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
MRPL55-228ENST00000476267 HYLS1Q96M11 299 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 WFDC1Q9HC57 220 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 MBD2Q9UBB5 411 aa8.76□□□□□ -1.01
MRPL55-228ENST00000476267 UPK1BO75841 260 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 PQLC2Q6ZP29 291 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 GOLT1AQ6ZVE7 132 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 Q8N814 137 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 S100ZQ8WXG8 99 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 MARVELD1Q9BSK0 173 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 SMIM3Q9BZL3 60 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 C11orf21Q9P2W6 132 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 RPH3ALQ9UNE2 315 aa8.75□□□□□ -1.01
MRPL55-228ENST00000476267 IGLV5-52A0A0A0MRZ9 124 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 FBLL1A6NHQ2 334 aaKnown RBP8.74□□□□□ -1.01
MRPL55-228ENST00000476267 INMT-MINDY4F8WBC2 141 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 RS1O15537 224 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 RPL12P30050 165 aaKnown RBP8.74□□□□□ -1.01
MRPL55-228ENST00000476267 ZNF80P51504 273 aaPredicted RBP8.74□□□□□ -1.01
MRPL55-228ENST00000476267 GNG5P63218 68 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 FAM74A1Q5RGS3 127 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 CFAP126Q5VTH2 177 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 CMTM2Q8TAZ6 248 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 C9orf85Q96MD7 179 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 SDF2L1Q9HCN8 221 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 FAM30AQ9NZY2 134 aa8.74□□□□□ -1.01
MRPL55-228ENST00000476267 DMBT1Q9UGM3 2413 aaPredicted RBP8.73□□□□□ -1.01
MRPL55-228ENST00000476267 TRBV6-4A0A1B0GX49 114 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 PPT1P50897 306 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 RAB2AP61019 212 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 NHLRC2Q8NBF2 726 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 SUN5Q8TC36 379 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 SCGB1C1Q8TD33 95 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 ASB13Q8WXK3 278 aa8.73□□□□□ -1.01
MRPL55-228ENST00000476267 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 PSCAO43653 123 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 CIDEAO60543 219 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 IGLV2-11P01706 119 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 PFN1P07737 140 aaKnown RBP8.72□□□□□ -1.01
MRPL55-228ENST00000476267 PET100P0DJ07 73 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 LINC00694P0DN24 101 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 RHOHQ15669 191 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 ACOT6Q3I5F7 207 aaPredicted RBP8.72□□□□□ -1.01
MRPL55-228ENST00000476267 ZNF876PQ49A33 203 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 LELP1Q5T871 98 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 Q6ZSN1 163 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 PTH2Q96A98 100 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 BOLA1Q9Y3E2 137 aa8.72□□□□□ -1.01
MRPL55-228ENST00000476267 TRAV8-6A0A0B4J262 113 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 C1QBP02746 253 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 TCRAP04437 139 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 RNASE3P12724 160 aaKnown RBP8.71□□□□□ -1.02
MRPL55-228ENST00000476267 WFDC2Q14508 124 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 LAGE3Q14657 143 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 OR10J3Q5JRS4 329 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 Q6ZSA8 131 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 TMEM75Q8N9X5 138 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 SGK494Q96LW2 274 aa8.71□□□□□ -1.02
MRPL55-228ENST00000476267 SERTM2A0A1B0GWG4 89 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 A0A1W2PPV4 95 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 PGPEP1LA6NFU8 196 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 HMGB3O15347 200 aaKnown RBP8.7□□□□□ -1.02
MRPL55-228ENST00000476267 IGHV3-30P01768 117 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 ARL14EPLP0DKL9 152 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 IGHV3-30-5P0DP03 117 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 ZNF506Q5JVG8 444 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 Q8N3U1 123 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 OR10G9Q8NGN4 311 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 OR10G7Q8NGN6 311 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 PRADC1Q9BSG0 188 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 Q9HAA7 133 aa8.7□□□□□ -1.02
MRPL55-228ENST00000476267 IGHV3-73A0A0B4J1V6 119 aa8.69□□□□□ -1.02
MRPL55-228ENST00000476267 GCGP01275 180 aa8.69□□□□□ -1.02
MRPL55-228ENST00000476267 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
MRPL55-228ENST00000476267 C5orf17Q8NAS9 161 aa8.69□□□□□ -1.02
MRPL55-228ENST00000476267 OR2G3Q8NGZ4 309 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms