RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CRIP2P52943 208 aaPredicted RBP5.27□□□□□ -1.57
UBR4-212ENST00000475973 NDPQ00604 133 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 C19orf54Q5BKX5 351 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 MINOS1Q5TGZ0 78 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 AMN1Q8IY45 258 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 OR4C5Q8NGB2 326 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 PRSS3P2Q8NHM4 247 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 PHLDA1Q8WV24 401 aaPredicted RBP5.27□□□□□ -1.57
UBR4-212ENST00000475973 TIMD4Q96H15 378 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 PLA2G2DQ9UNK4 145 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 MINOS1-NBL1R4GNA1 71 aa5.27□□□□□ -1.57
UBR4-212ENST00000475973 CLPSL1A2RUU4 121 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 SNAI2O43623 268 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 BUB3O43684 328 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 NPYP01303 97 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 MSMBP08118 114 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 DLX1P56177 255 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 VAMP3Q15836 100 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 ZNF502Q8TBZ5 544 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 IFI27L1Q96BM0 104 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 TM2D2Q9BX73 214 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 AAMDCQ9H7C9 122 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 HIF1ANQ9NWT6 349 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 C21orf62Q9NYP8 219 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 SMPXQ9UHP9 88 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 RPH3ALQ9UNE2 315 aa5.26□□□□□ -1.57
UBR4-212ENST00000475973 IGHV7-81A0A0B4J1V7 117 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 A0A1B0GWB2 263 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 GAGE12BA1L429 117 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 FABP5P3A8MUU1 101 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 LYNX1G3V0Z9 82 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 K7EP34 96 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 SMIM17P0DL12 118 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 LYNX1P0DP58 116 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 S100A7P31151 101 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 KRTAP24-1Q3LI83 254 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 PRR31Q5SQ13 230 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 C9orf47Q6ZRZ4 202 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 APRG1Q8IVJ8 170 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 POM121L12Q8N7R1 296 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 Q8N9W7 124 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 FER1L6-AS1Q8NA97 138 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 FAM110DQ8TAY7 271 aaPredicted RBP5.25□□□□□ -1.57
UBR4-212ENST00000475973 ARPC1AQ92747 370 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 VGLL1Q99990 258 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 MCRIP2Q9BUT9 160 aaKnown RBP5.25□□□□□ -1.57
UBR4-212ENST00000475973 NXT2Q9NPJ8 142 aaKnown RBP5.25□□□□□ -1.57
UBR4-212ENST00000475973 LENEPQ9Y5L5 61 aa5.25□□□□□ -1.57
UBR4-212ENST00000475973 ABCA1O95477 2261 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 TRAV8-2A0A0B4J237 113 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 IGKV3D-20A0A0C4DH25 116 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 IGHV7-4-1A0A0J9YVY3 117 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 A6NDN8 102 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 G3V4G9 280 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 GNG7O60262 68 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 CSN3P07498 182 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 TAL2Q16559 108 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 CCDC144NLQ6NUI1 221 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 DYNAPQ8N1N2 210 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 Q8N8P6 123 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 NRACQ8N912 160 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 ZNF418Q8TF45 676 aaPredicted RBP5.24□□□□□ -1.57
UBR4-212ENST00000475973 ASCL2Q99929 193 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 SLC50A1Q9BRV3 221 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 SIRPDQ9H106 197 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 THYN1Q9P016 225 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 FBN1P35555 2871 aaKnown RBP5.24□□□□□ -1.57
UBR4-212ENST00000475973 ROS1P08922 2347 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 CSPG4Q6UVK1 2322 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 JMJD1CQ15652 2540 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 ZANQ9Y493 2812 aa5.24□□□□□ -1.57
UBR4-212ENST00000475973 IGKV2-40A0A087WW87 121 aaPredicted RBP5.23□□□□□ -1.57
UBR4-212ENST00000475973 TRAV12-1A0A0B4J245 112 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 J3QLI3 93 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 K7EMI3 77 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 K7ERU9 68 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 ATP5LO75964 103 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 CNIH1O95406 144 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 IGKV2D-40P01614 121 aaPredicted RBP5.23□□□□□ -1.57
UBR4-212ENST00000475973 APELAP0DMC3 54 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 GATA3P23771 443 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 COX7A1P24310 79 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 CKS2P33552 79 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 CACNG7P62955 275 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 OR5A1Q8NGJ0 315 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 FAM19A4Q96LR4 140 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 CSTL1Q9H114 145 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 DKK2Q9UBU2 259 aa5.23□□□□□ -1.57
UBR4-212ENST00000475973 CHTOPQ9Y3Y2 248 aaKnown RBP5.23□□□□□ -1.57
UBR4-212ENST00000475973 FBN3Q75N90 2809 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 IGKV2D-26A0A0A0MRZ7 120 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 TRBV7-9A0A0J9YWB2 115 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 A0A1W2PPM0 123 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 A0A1W2PRD5 423 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 A0A1W2PRF3 423 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 A0A1W2PRM7 423 aa5.22□□□□□ -1.57
UBR4-212ENST00000475973 PRAC2D3DTV9 90 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms