RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 SUMO1P63165 101 aaKnown RBP7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 TTC32Q5I0X7 151 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 CYB561D1Q8N8Q1 229 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 TMEM75Q8N9X5 138 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 VSIG2Q96IQ7 327 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 MDFICQ9P1T7 246 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 PRO0255Q9UI72 69 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 ICOSQ9Y6W8 199 aa7.9□□□□□ -1.14
NUDCD3-206ENST00000475952 A0A096LPF7 62 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 PAX4O43316 350 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 TYMSP04818 313 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 FLI1Q01543 452 aaPredicted RBP7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 C6orf223Q8N319 242 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 RASL10AQ92737 203 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 TVP23CQ96ET8 276 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 SGK494Q96LW2 274 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 Q9H8V8 135 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 EPDR1Q9UM22 224 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 PSG8Q9UQ74 426 aa7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 MRPS16Q9Y3D3 137 aaKnown RBP7.89□□□□□ -1.15
NUDCD3-206ENST00000475952 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 GCGP01275 180 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 PPT1P50897 306 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 CRYBA4P53673 196 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 ZNF345Q14585 488 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 ESRGQ1W209 222 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 PRNTQ86SH4 94 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 ZNF575Q86XF7 245 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 HHLA3Q9XRX5 114 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 DMBT1Q9UGM3 2413 aaPredicted RBP7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
NUDCD3-206ENST00000475952 TRAV4A0A0B4J268 109 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 IGHV3-16A0A0C4DH30 117 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 A0A1W2PPQ1 181 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 MAP1LC3B2A6NCE7 125 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 SMLR1H3BR10 107 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 M0R2P5 195 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 IFNA7P01567 189 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 PFN1P07737 140 aaKnown RBP7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 FGF8P55075 233 aaPredicted RBP7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 FHL2Q14192 279 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 SMUG1Q53HV7 270 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 SAPCD1Q5SSQ6 148 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 PCNPQ8WW12 178 aaKnown RBP7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 ZNF479Q96JC4 524 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 C8orf49Q96NF6 230 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 MAP1LC3BQ9GZQ8 125 aa7.87□□□□□ -1.15
NUDCD3-206ENST00000475952 GNRH2O43555 120 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 IGLV2-11P01706 119 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 SFTA3P0C7M3 94 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 UBE2G2P60604 165 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 MRPL23Q16540 153 aaKnown RBP7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 OR4C5Q8NGB2 326 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 STOML3Q8TAV4 291 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 CYTL1Q9NRR1 136 aa7.86□□□□□ -1.15
NUDCD3-206ENST00000475952 KANTRA0A1W2PQU2 76 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 FAM74A7A6NL05 159 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 HMSDA8MTL9 139 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 C9JCJ5 164 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 PEX7O00628 323 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 ORM1P02763 201 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 SRIP30626 198 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 ZNF80P51504 273 aaPredicted RBP7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 KCNRGQ8N5I3 272 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 HIST1H2BAQ96A08 127 aa7.85□□□□□ -1.15
NUDCD3-206ENST00000475952 A0A0D9SG52 128 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 K7EQD1 137 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 SIVA1O15304 175 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 BTF3P20290 206 aaKnown RBP7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 NEGR1Q7Z3B1 354 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 Q86TA4 180 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 TXNDC17Q9BRA2 123 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 TCEAL7Q9BRU2 100 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 ZNF471Q9BX82 626 aaPredicted RBP7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 ARL2-SNX15V9GYD0 113 aa7.84□□□□□ -1.15
NUDCD3-206ENST00000475952 TRAV34A0A0B4J273 112 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 UMAD1C9J7I0 102 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 BCL2L11O43521 198 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 NXPH4O95158 308 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 SEC11BP0C7V7 166 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 GYPEP15421 78 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 UBE2G1P62253 170 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 EIF5AP63241 154 aaKnown RBP7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 ZNF876PQ49A33 203 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 KRTAP1-5Q9BYS1 174 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 C11orf21Q9P2W6 132 aa7.83□□□□□ -1.16
NUDCD3-206ENST00000475952 CIDEAO60543 219 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 PFDN1O60925 122 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 FHITP49789 147 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 TNP2Q05952 138 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 CST9LP1Q5W188 147 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 LYPD5Q6UWN5 251 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 FAM213BQ8TBF2 198 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 FMC1Q96HJ9 113 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 LINC00479Q96M42 142 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 C9orf85Q96MD7 179 aa7.82□□□□□ -1.16
NUDCD3-206ENST00000475952 FABP5P3A8MUU1 101 aa7.81□□□□□ -1.16
NUDCD3-206ENST00000475952 S100A4P26447 101 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms