RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 MIC13Q5XKP0 118 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 KCNRGQ8N5I3 272 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 TCTEX1D1Q8N7M0 179 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 TCEAL7Q9BRU2 100 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 PSMG3Q9BT73 122 aaPredicted RBP2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 PDCD10Q9BUL8 212 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 SNRNP25Q9BV90 132 aaKnown RBP2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 REG4Q9BYZ8 158 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 KIDINS220Q9ULH0 1771 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 ABCA5Q8WWZ7 1642 aa2.35□□□□□ -2.03
SRGAP3-205ENST00000475560 CUL7Q14999 1698 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 COL5A3P25940 1745 aaPredicted RBP2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 TRAV12-2A0A075B6T6 113 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 SPAARA0A1B0GVQ0 90 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 F8W1H4 67 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 J3QLW9 94 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 MEIG1Q5JSS6 88 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 LINC01545Q5VT33 79 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 KLK9Q9UKQ9 250 aa2.34□□□□□ -2.03
SRGAP3-205ENST00000475560 SHROOM2Q13796 1616 aa2.34□□□□□ -2.04
SRGAP3-205ENST00000475560 MYH7P12883 1935 aa2.34□□□□□ -2.04
SRGAP3-205ENST00000475560 TANC2Q9HCD6 1990 aa2.34□□□□□ -2.04
SRGAP3-205ENST00000475560 NCOA2Q15596 1464 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 FYCO1Q9BQS8 1478 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 CDK12Q9NYV4 1490 aaPredicted RBP2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 LRRC7Q96NW7 1537 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 CHD8Q9HCK8 2581 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 ZFC3H1O60293 1989 aaKnown RBP2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 MADDQ8WXG6 1647 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 CORTO00230 105 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 GNG2P59768 71 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 MRPS10P82664 201 aaKnown RBP2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 FAM74A1Q5RGS3 127 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 PP6455Q8WZ26 134 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 SCN3BQ9NY72 215 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 POLR1AO95602 1720 aaPredicted RBP2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 GOLGA3Q08378 1498 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 PLEKHH2Q8IVE3 1493 aa2.33□□□□□ -2.04
SRGAP3-205ENST00000475560 MAPKBP1O60336 1514 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 TOP2AP11388 1531 aaKnown RBP2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 ZMYM4Q5VZL5 1548 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 AKAP12Q02952 1782 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 TRBV6-4A0A1B0GX49 114 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 H3BQF6 201 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 AKAIN1P0CW23 69 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 BTG2P78543 158 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 C5orf17Q8NAS9 161 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 VSTM2AQ8TAG5 236 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 TAS2R8Q9NYW2 309 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 CFTRP13569 1480 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
SRGAP3-205ENST00000475560 KIAA0556O60303 1618 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 QRICH2Q9H0J4 1663 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 MPDZO75970 2070 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 SMIM31A0A1B0GVY4 71 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 CCDC179H3BU77 68 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 DEFB103AP81534 67 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 SLC25A26Q70HW3 274 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 CDC42SE1Q9NRR8 79 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 UACAQ9BZF9 1416 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 CCDC88BA6NC98 1476 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 A2ML1A8K2U0 1454 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 MYOM2P54296 1465 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 FANCD2Q9BXW9 1451 aa2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 COL4A4P53420 1690 aaPredicted RBP2.31□□□□□ -2.04
SRGAP3-205ENST00000475560 MYH6P13533 1939 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 H3BRM9 83 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 IGHV3-33P01772 117 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 COPS9Q8WXC6 57 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 C14orf144Q96I85 54 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 BOKQ9UMX3 212 aaPredicted RBP2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 ZFP30Q9Y2G7 519 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 MAGI1Q96QZ7 1491 aaPredicted RBP2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 DNMBPQ6XZF7 1577 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 VWDEQ8N2E2 1590 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 HELZP42694 1942 aaKnown RBP2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 MYO9BQ13459 2157 aa2.3□□□□□ -2.04
SRGAP3-205ENST00000475560 MYH13Q9UKX3 1938 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 BCORL1Q5H9F3 1711 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 KIF14Q15058 1648 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 INO80Q9ULG1 1556 aaPredicted RBP2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 SHANK2Q9UPX8 1470 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 TRGV2A0A075B6R0 118 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 SMIM6P0DI80 62 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 GNG4P50150 75 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 C15orf53Q8NAA6 179 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 DYNLRB2Q8TF09 96 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 KRTAP4-3Q9BYR4 195 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 RERGLQ9H628 205 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 BRWD1Q9NSI6 2320 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 ATG2AQ2TAZ0 1938 aa2.29□□□□□ -2.04
SRGAP3-205ENST00000475560 DAPK1P53355 1430 aa2.28□□□□□ -2.04
SRGAP3-205ENST00000475560 TRAV2A0A0B4J234 112 aa2.28□□□□□ -2.04
SRGAP3-205ENST00000475560 A0A1W2PRS3 328 aa2.28□□□□□ -2.04
SRGAP3-205ENST00000475560 SNAPC5O75971 98 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms