RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 KCNIP2Q9NS61 270 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 C11orf21Q9P2W6 132 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 LENEPQ9Y5L5 61 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 F6UZH7 168 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 SSNA1O43805 119 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 IFNA5P01569 189 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 IGLV2-11P01706 119 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 TYMSP04818 313 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 SRIP30626 198 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 KHDC3LQ587J8 217 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 Q5BKY6 102 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 DPPA3Q6W0C5 159 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 GOLT1AQ6ZVE7 132 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 SCGB1C1Q8TD33 95 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 SPXQ9BT56 116 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 NAGKQ9UJ70 344 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 LY96Q9Y6Y9 160 aa4.73□□□□□ -1.65
HDAC3-207ENST00000475549 TRGV11A0A075B6L2 103 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 M0R2P5 195 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 ORM1P02763 201 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 GATA1P15976 413 aaPredicted RBP4.72□□□□□ -1.65
HDAC3-207ENST00000475549 TAS2R45P59539 299 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 ARL6IP6Q8N6S5 226 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 OR4C5Q8NGB2 326 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 OR10G9Q8NGN4 311 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 OR10G7Q8NGN6 311 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 SUN5Q8TC36 379 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 TREM1Q9NP99 234 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 PTTG2Q9NZH5 202 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 MSRB1Q9NZV6 116 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 RPH3ALQ9UNE2 315 aa4.72□□□□□ -1.65
HDAC3-207ENST00000475549 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.65
HDAC3-207ENST00000475549 TRAV21A0A0B4J279 112 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 LRCOL1A6NCL2 159 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 TCRAP04437 139 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 STAG3L2P0CL84 134 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 STAG3L3P0CL85 134 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 ARL14EPLP0DKL9 152 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 ERVFC1-1P60608 527 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 ACOT6Q3I5F7 207 aaPredicted RBP4.71□□□□□ -1.66
HDAC3-207ENST00000475549 CFAP126Q5VTH2 177 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 PQLC2Q6ZP29 291 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 Q6ZSN1 163 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 SLC25A29Q8N8R3 303 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 CMTM2Q8TAZ6 248 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 RAB24Q969Q5 203 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 Q9UF83 564 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 MYCBP2O75592 4640 aa4.71□□□□□ -1.66
HDAC3-207ENST00000475549 TRAV9-2A0A087WT02 112 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 IGHV3-73A0A0B4J1V6 119 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 A0A1W2PPV4 95 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 PGPEP1LA6NFU8 196 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 EPM2AB3EWF7 344 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 GGTLC3B5MD39 225 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 C9JCJ5 164 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 K7EP13 123 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 RS1O15537 224 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 CRYGDP07320 174 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 PET100P0DJ07 73 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 RNASE3P12724 160 aaKnown RBP4.7□□□□□ -1.66
HDAC3-207ENST00000475549 EVI2AP22794 236 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 TIRAPP58753 221 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 FAM74A1Q5RGS3 127 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 CDPF1Q6NVV7 123 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 NFE4Q86UQ8 179 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 Q8N3U1 123 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 TMEM75Q8N9X5 138 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 HSD17B11Q8NBQ5 300 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 OR2G3Q8NGZ4 309 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 ASB13Q8WXK3 278 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 LINC00479Q96M42 142 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 C9orf85Q96MD7 179 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 TXNDC17Q9BRA2 123 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 SH3BGRL3Q9H299 93 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 ALG5Q9Y673 324 aa4.7□□□□□ -1.66
HDAC3-207ENST00000475549 IGKV3D-20A0A0C4DH25 116 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 FBLL1A6NHQ2 334 aaKnown RBP4.69□□□□□ -1.66
HDAC3-207ENST00000475549 IBA57-AS1B1ANH7 110 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 GCGP01275 180 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 SMR3BP02814 79 aaPredicted RBP4.69□□□□□ -1.66
HDAC3-207ENST00000475549 PFN1P07737 140 aaKnown RBP4.69□□□□□ -1.66
HDAC3-207ENST00000475549 ATP6V0CP27449 155 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 GCHFRP30047 84 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 CDC34P49427 236 aaPredicted RBP4.69□□□□□ -1.66
HDAC3-207ENST00000475549 DEFA1P59665 94 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 DEFA3P59666 94 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 SUMO1P63165 101 aaKnown RBP4.69□□□□□ -1.66
HDAC3-207ENST00000475549 HAMPP81172 84 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 ZNF726P1Q15940 193 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 ZNF876PQ49A33 203 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 LINC01556Q5JQF7 62 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 C5orf17Q8NAS9 161 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 PCNPQ8WW12 178 aaKnown RBP4.69□□□□□ -1.66
HDAC3-207ENST00000475549 KCNS1Q96KK3 526 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 AQP10Q96PS8 301 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 SDF2L1Q9HCN8 221 aa4.69□□□□□ -1.66
HDAC3-207ENST00000475549 TRAV34A0A0B4J273 112 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms