RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 IGLV5-52A0A0A0MRZ9 124 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 TRAV4A0A0B4J268 109 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 CSN1S1P47710 185 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 S100A10P60903 97 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 Q5BKY6 102 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 MIR17HGQ75NE6 70 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 KCNIP2Q9NS61 270 aa11.98□□□□□ -0.49
PCGF3-209ENST00000475288 LRRC37A5PQ49AS3 106 aa11.97□□□□□ -0.49
PCGF3-209ENST00000475288 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
PCGF3-209ENST00000475288 FAM159AQ6UWV7 190 aa11.97□□□□□ -0.49
PCGF3-209ENST00000475288 PHYHIPLQ96FC7 376 aa11.97□□□□□ -0.49
PCGF3-209ENST00000475288 PAXXQ9BUH6 204 aa11.97□□□□□ -0.49
PCGF3-209ENST00000475288 MBD2Q9UBB5 411 aa11.97□□□□□ -0.49
PCGF3-209ENST00000475288 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 ZNF345Q14585 488 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 OR11H4Q8NGC9 324 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 TMED6Q8WW62 240 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 OR5AC2Q9NZP5 309 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 TNFSF18Q9UNG2 199 aa11.96□□□□□ -0.49
PCGF3-209ENST00000475288 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 SMLR1H3BR10 107 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 PSCAO43653 123 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 OR10J4P0C629 311 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 TMEM183BQ1AE95 376 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 TMEM183AQ8IXX5 376 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 AQP10Q96PS8 301 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 SLC25A31Q9H0C2 315 aa11.95□□□□□ -0.5
PCGF3-209ENST00000475288 FXYD6-FXYD2A0A087WZ82 144 aa11.94□□□□□ -0.5
PCGF3-209ENST00000475288 M0R2P5 195 aa11.94□□□□□ -0.5
PCGF3-209ENST00000475288 OR4C5Q8NGB2 326 aa11.94□□□□□ -0.5
PCGF3-209ENST00000475288 OR5C1Q8NGR4 320 aa11.94□□□□□ -0.5
PCGF3-209ENST00000475288 RNF222A6NCQ9 220 aa11.93□□□□□ -0.5
PCGF3-209ENST00000475288 NHLH2Q02577 135 aa11.93□□□□□ -0.5
PCGF3-209ENST00000475288 Q8N814 137 aa11.93□□□□□ -0.5
PCGF3-209ENST00000475288 DIRC3C9JPN6 131 aa11.92□□□□□ -0.5
PCGF3-209ENST00000475288 OR7C2O60412 319 aa11.92□□□□□ -0.5
PCGF3-209ENST00000475288 GATA1P15976 413 aaPredicted RBP11.92□□□□□ -0.5
PCGF3-209ENST00000475288 RANP62826 216 aaKnown RBP11.92□□□□□ -0.5
PCGF3-209ENST00000475288 ARL6IP6Q8N6S5 226 aa11.92□□□□□ -0.5
PCGF3-209ENST00000475288 INO80EQ8NBZ0 244 aaPredicted RBP11.92□□□□□ -0.5
PCGF3-209ENST00000475288 WDR61Q9GZS3 305 aaKnown RBP11.92□□□□□ -0.5
PCGF3-209ENST00000475288 IGHV3-16A0A0C4DH30 117 aa11.91□□□□□ -0.5
PCGF3-209ENST00000475288 A0A0D9SG52 128 aa11.91□□□□□ -0.5
PCGF3-209ENST00000475288 LOC100131303A0A0U1RQF7 123 aa11.91□□□□□ -0.5
PCGF3-209ENST00000475288 CIDEAO60543 219 aa11.91□□□□□ -0.5
PCGF3-209ENST00000475288 PFN1P07737 140 aaKnown RBP11.91□□□□□ -0.5
PCGF3-209ENST00000475288 HAMPP81172 84 aa11.91□□□□□ -0.5
PCGF3-209ENST00000475288 C9orf62Q8N4C0 152 aa11.91□□□□□ -0.5
PCGF3-209ENST00000475288 C17orf112F2Z3M2 114 aa11.9□□□□□ -0.5
PCGF3-209ENST00000475288 ARPC5O15511 151 aa11.9□□□□□ -0.5
PCGF3-209ENST00000475288 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
PCGF3-209ENST00000475288 PPT1P50897 306 aa11.9□□□□□ -0.5
PCGF3-209ENST00000475288 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
PCGF3-209ENST00000475288 LAGE3Q14657 143 aa11.9□□□□□ -0.5
PCGF3-209ENST00000475288 KCNRGQ8N5I3 272 aa11.9□□□□□ -0.5
PCGF3-209ENST00000475288 NHLRC2Q8NBF2 726 aa11.9□□□□□ -0.5
PCGF3-209ENST00000475288 TRAV8-6A0A0B4J262 113 aa11.89□□□□□ -0.51
PCGF3-209ENST00000475288 J3QL48 77 aa11.89□□□□□ -0.51
PCGF3-209ENST00000475288 FAM30AQ9NZY2 134 aa11.89□□□□□ -0.51
PCGF3-209ENST00000475288 HSPB11Q9Y547 144 aa11.89□□□□□ -0.51
PCGF3-209ENST00000475288 TRAV21A0A0B4J279 112 aa11.88□□□□□ -0.51
PCGF3-209ENST00000475288 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
PCGF3-209ENST00000475288 TAS2R45P59539 299 aa11.88□□□□□ -0.51
PCGF3-209ENST00000475288 LGALSLQ3ZCW2 172 aaPredicted RBP11.88□□□□□ -0.51
PCGF3-209ENST00000475288 KHDC3LQ587J8 217 aa11.88□□□□□ -0.51
PCGF3-209ENST00000475288 Q6ZSA8 131 aa11.88□□□□□ -0.51
PCGF3-209ENST00000475288 KCNS1Q96KK3 526 aa11.88□□□□□ -0.51
PCGF3-209ENST00000475288 NAGKQ9UJ70 344 aa11.88□□□□□ -0.51
PCGF3-209ENST00000475288 TRBV6-4A0A1B0GX49 114 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 FBLL1A6NHQ2 334 aaKnown RBP11.87□□□□□ -0.51
PCGF3-209ENST00000475288 KRTAP29-1A8MX34 341 aaPredicted RBP11.87□□□□□ -0.51
PCGF3-209ENST00000475288 TAAR5O14804 337 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 GNRH2O43555 120 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 TYMSP04818 313 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 LELP1Q5T871 98 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 ATP5SQ99766 215 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 OTORQ9NRC9 128 aa11.87□□□□□ -0.51
PCGF3-209ENST00000475288 NKX2-5P52952 324 aaPredicted RBP11.86□□□□□ -0.51
PCGF3-209ENST00000475288 RHOHQ15669 191 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 OR10J3Q5JRS4 329 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 FAM74A1Q5RGS3 127 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 SLC25A29Q8N8R3 303 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 PRADC1Q9BSG0 188 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 TM2D2Q9BX73 214 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 SDF2L1Q9HCN8 221 aa11.86□□□□□ -0.51
PCGF3-209ENST00000475288 BCL2L11O43521 198 aa11.85□□□□□ -0.51
PCGF3-209ENST00000475288 TMUB2Q71RG4 321 aa11.85□□□□□ -0.51
PCGF3-209ENST00000475288 CMTM2Q8TAZ6 248 aa11.85□□□□□ -0.51
PCGF3-209ENST00000475288 Q9HAA7 133 aa11.85□□□□□ -0.51
PCGF3-209ENST00000475288 RS1O15537 224 aa11.84□□□□□ -0.51
PCGF3-209ENST00000475288 FFAR4Q5NUL3 377 aa11.84□□□□□ -0.51
PCGF3-209ENST00000475288 PTH2Q96A98 100 aa11.84□□□□□ -0.51
PCGF3-209ENST00000475288 GTSF1LQ9H1H1 148 aa11.84□□□□□ -0.51
PCGF3-209ENST00000475288 PGPA6NDG6 321 aa11.83□□□□□ -0.52
PCGF3-209ENST00000475288 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
PCGF3-209ENST00000475288 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.52
PCGF3-209ENST00000475288 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
PCGF3-209ENST00000475288 SH3BGRL3Q9H299 93 aa11.83□□□□□ -0.52
PCGF3-209ENST00000475288 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms