RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 TAS2R45P59539 299 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 ZNF726P1Q15940 193 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
CCDC78-209ENST00000474647 KHDC3LQ587J8 217 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 TEX261Q6UWH6 196 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 ALKAL2Q6UX46 152 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 BLNKQ8WV28 456 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
CCDC78-209ENST00000474647 FAM167A-AS1Q96KT0 104 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 ACTR3CQ9C0K3 210 aaPredicted RBP9.51□□□□□ -0.89
CCDC78-209ENST00000474647 TMEM14CQ9P0S9 112 aa9.51□□□□□ -0.89
CCDC78-209ENST00000474647 TRBV19A0A075B6N1 114 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 ZNF253O75346 499 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 STAG3L2P0CL84 134 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 STAG3L3P0CL85 134 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 GCSHP23434 173 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 RAB5CP51148 216 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 IBA57Q5T440 356 aaKnown RBP9.5□□□□□ -0.89
CCDC78-209ENST00000474647 PRR9Q5T870 116 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 NEGR1Q7Z3B1 354 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 WFDC10BQ8IUB3 73 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 EXOC3-AS1Q8N2X6 119 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 RAB24Q969Q5 203 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 LINC00477Q96M19 166 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 VGLL1Q99990 258 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 AGPAT4-IT1Q9H0P7 198 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 MSRB1Q9NZV6 116 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 HHLA3Q9XRX5 114 aa9.5□□□□□ -0.89
CCDC78-209ENST00000474647 IGKV2-40A0A087WW87 121 aaPredicted RBP9.49□□□□□ -0.89
CCDC78-209ENST00000474647 TRGV4A0A0C4DH28 118 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 EIF3GO75821 320 aaKnown RBP eCLIP9.49□□□□□ -0.89
CCDC78-209ENST00000474647 IGKV2D-40P01614 121 aaPredicted RBP9.49□□□□□ -0.89
CCDC78-209ENST00000474647 PYYP10082 97 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 SRIP30626 198 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 FHITP49789 147 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 FAM74A1Q5RGS3 127 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 TMEM78Q5T7P6 136 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 PQLC2Q6ZP29 291 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 Q6ZQT7 251 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 FAM213BQ8TBF2 198 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 PCNPQ8WW12 178 aaKnown RBP9.49□□□□□ -0.89
CCDC78-209ENST00000474647 FAM19A4Q96LR4 140 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 OR51M1Q9H341 326 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 PRELID1Q9Y255 219 aa9.49□□□□□ -0.89
CCDC78-209ENST00000474647 IGHV1OR15-1A0A075B7D0 117 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 FAM229AH3BQW9 127 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 HMGB3O15347 200 aaKnown RBP9.48□□□□□ -0.89
CCDC78-209ENST00000474647 OR7C2O60412 319 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 NDUFB4O95168 129 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 CRISP2P16562 243 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 EVI2AP22794 236 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 ZNF415Q09FC8 603 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 SLAQ13239 276 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 FHL2Q14192 279 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 PAXXQ9BUH6 204 aa9.48□□□□□ -0.89
CCDC78-209ENST00000474647 MAP1LC3B2A6NCE7 125 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 K7EQD1 137 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 CXorf1O96002 111 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 IFNA7P01567 189 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 SFTA3P0C7M3 94 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 ARL14EPLP0DKL9 152 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 HIST1H1EP10412 219 aaKnown RBP9.47□□□□□ -0.89
CCDC78-209ENST00000474647 UBE2L3P68036 154 aaKnown RBP9.47□□□□□ -0.89
CCDC78-209ENST00000474647 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 Q6ZSN1 163 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 FXYD5Q96DB9 178 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 MAP1LC3BQ9GZQ8 125 aa9.47□□□□□ -0.89
CCDC78-209ENST00000474647 IGLV5-52A0A0A0MRZ9 124 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 PSCAO43653 123 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 CRYGDP07320 174 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 OR10J4P0C629 311 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 PDE6HQ13956 83 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 MUC21Q5SSG8 566 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 Q8TAT8 98 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 SUN5Q8TC36 379 aa9.46□□□□□ -0.9
CCDC78-209ENST00000474647 LINC00862A6NCI5 91 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 J3QL48 77 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 H2AFB1P0C5Y9 115 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 GYPEP15421 78 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 GCHFRP30047 84 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 FGF8P55075 233 aaPredicted RBP9.45□□□□□ -0.9
CCDC78-209ENST00000474647 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 TMEM167BQ9NRX6 74 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 ZNF492Q9P255 531 aa9.45□□□□□ -0.9
CCDC78-209ENST00000474647 TRAV1-1A0A0B4J248 108 aa9.44□□□□□ -0.9
CCDC78-209ENST00000474647 K7EP13 123 aa9.44□□□□□ -0.9
CCDC78-209ENST00000474647 NMBP08949 121 aa9.44□□□□□ -0.9
CCDC78-209ENST00000474647 NBEAP1P0C6P0 100 aa9.44□□□□□ -0.9
CCDC78-209ENST00000474647 CLLU1Q5K131 121 aa9.44□□□□□ -0.9
CCDC78-209ENST00000474647 SFT2D1Q8WV19 159 aa9.44□□□□□ -0.9
CCDC78-209ENST00000474647 BLOC1S1P78537 153 aa9.43□□□□□ -0.9
CCDC78-209ENST00000474647 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
CCDC78-209ENST00000474647 TXNDC17Q9BRA2 123 aa9.43□□□□□ -0.9
CCDC78-209ENST00000474647 C9JCJ5 164 aa9.42□□□□□ -0.9
CCDC78-209ENST00000474647 TEX46H3BTG2 121 aa9.42□□□□□ -0.9
CCDC78-209ENST00000474647 ORM1P02763 201 aa9.42□□□□□ -0.9
CCDC78-209ENST00000474647 ZNF138P52744 262 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms