RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 CENPWQ5EE01 88 aa11.21□□□□□ -0.61
COL1A1-204ENST00000474644 CASC10Q5T4H9 136 aa11.21□□□□□ -0.61
COL1A1-204ENST00000474644 KCNS1Q96KK3 526 aa11.21□□□□□ -0.61
COL1A1-204ENST00000474644 MLST8Q9BVC4 326 aa11.21□□□□□ -0.61
COL1A1-204ENST00000474644 EIF5A2Q9GZV4 153 aaKnown RBP11.21□□□□□ -0.61
COL1A1-204ENST00000474644 SDF2L1Q9HCN8 221 aa11.21□□□□□ -0.61
COL1A1-204ENST00000474644 CSMD3Q7Z407 3707 aa11.21□□□□□ -0.61
COL1A1-204ENST00000474644 RAB19A4D1S5 217 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 SH2D1AO60880 128 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 TYMSP04818 313 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 DAD1P61803 113 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 DAZ2Q13117 558 aaKnown RBP11.2□□□□□ -0.62
COL1A1-204ENST00000474644 FAM162BQ5T6X4 162 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 PHLDA1Q8WV24 401 aaPredicted RBP11.2□□□□□ -0.62
COL1A1-204ENST00000474644 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
COL1A1-204ENST00000474644 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 IGHV3-16A0A0C4DH30 117 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 GNRH2O43555 120 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 DEFB130BP0DP73 79 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 DEFB130AP0DP74 79 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 GNG4P50150 75 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 IFITM2Q01629 132 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 ZNF674Q2M3X9 581 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 LINC00612Q8N6U2 182 aa11.19□□□□□ -0.62
COL1A1-204ENST00000474644 TRAV10A0A0B4J240 114 aa11.18□□□□□ -0.62
COL1A1-204ENST00000474644 IGKV3D-20A0A0C4DH25 116 aa11.18□□□□□ -0.62
COL1A1-204ENST00000474644 IGLV2-8P01709 118 aa11.18□□□□□ -0.62
COL1A1-204ENST00000474644 CEMP1Q6PRD7 247 aaPredicted RBP11.18□□□□□ -0.62
COL1A1-204ENST00000474644 PARLQ9H300 379 aa11.18□□□□□ -0.62
COL1A1-204ENST00000474644 SPINK4O60575 86 aa11.17□□□□□ -0.62
COL1A1-204ENST00000474644 NDUFS6O75380 124 aaKnown RBP11.17□□□□□ -0.62
COL1A1-204ENST00000474644 RAB14P61106 215 aa11.17□□□□□ -0.62
COL1A1-204ENST00000474644 PRR27Q6MZM9 219 aa11.17□□□□□ -0.62
COL1A1-204ENST00000474644 Q6ZTI0 123 aa11.17□□□□□ -0.62
COL1A1-204ENST00000474644 SMIM12Q96EX1 92 aa11.17□□□□□ -0.62
COL1A1-204ENST00000474644 TRGV1A0A0A0MS02 117 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 GAGE12BA1L429 117 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 PGPEP1LA6NFU8 196 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 C9JCJ5 164 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 M0R036 132 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 GAGE7O76087 117 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 ORM1P02763 201 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 SRP19P09132 144 aaKnown RBP11.16□□□□□ -0.62
COL1A1-204ENST00000474644 GAGE12FP0CL80 117 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 GAGE12GP0CL81 117 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 GAGE12IP0CL82 117 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 CEBPGP53567 150 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 LINC01559Q495D7 138 aa11.16□□□□□ -0.62
COL1A1-204ENST00000474644 MRPL16Q9NX20 251 aaKnown RBP11.16□□□□□ -0.62
COL1A1-204ENST00000474644 DEFB131BA0A096LNP1 70 aa11.15□□□□□ -0.62
COL1A1-204ENST00000474644 B4DEV8 164 aa11.15□□□□□ -0.62
COL1A1-204ENST00000474644 KRBOX1C9JBD0 128 aa11.15□□□□□ -0.62
COL1A1-204ENST00000474644 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.62
COL1A1-204ENST00000474644 SPXQ9BT56 116 aa11.15□□□□□ -0.62
COL1A1-204ENST00000474644 DYNC2H1Q8NCM8 4307 aaKnown RBP11.15□□□□□ -0.63
COL1A1-204ENST00000474644 ASIPP42127 132 aa11.14□□□□□ -0.63
COL1A1-204ENST00000474644 SRSF3P84103 164 aaKnown RBP11.14□□□□□ -0.63
COL1A1-204ENST00000474644 LGALS9BQ3B8N2 356 aa11.14□□□□□ -0.63
COL1A1-204ENST00000474644 CLLU1Q5K131 121 aa11.14□□□□□ -0.63
COL1A1-204ENST00000474644 C9orf85Q96MD7 179 aa11.14□□□□□ -0.63
COL1A1-204ENST00000474644 KLK5Q9Y337 293 aaPredicted RBP11.14□□□□□ -0.63
COL1A1-204ENST00000474644 TMSB15BA0A087X1C1 80 aa11.13□□□□□ -0.63
COL1A1-204ENST00000474644 C9JQL5 133 aa11.13□□□□□ -0.63
COL1A1-204ENST00000474644 ATP5G1P05496 136 aa11.13□□□□□ -0.63
COL1A1-204ENST00000474644 RNASE3P12724 160 aaKnown RBP11.13□□□□□ -0.63
COL1A1-204ENST00000474644 HTN3P15516 51 aa11.13□□□□□ -0.63
COL1A1-204ENST00000474644 RPL19P84098 196 aaKnown RBP11.13□□□□□ -0.63
COL1A1-204ENST00000474644 C18orf15Q96N68 181 aa11.13□□□□□ -0.63
COL1A1-204ENST00000474644 TRGV2A0A075B6R0 118 aa11.12□□□□□ -0.63
COL1A1-204ENST00000474644 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
COL1A1-204ENST00000474644 OR5I1Q13606 314 aa11.12□□□□□ -0.63
COL1A1-204ENST00000474644 PEA15Q15121 130 aa11.12□□□□□ -0.63
COL1A1-204ENST00000474644 ZNF575Q86XF7 245 aa11.12□□□□□ -0.63
COL1A1-204ENST00000474644 SMIM7Q9BQ49 75 aa11.12□□□□□ -0.63
COL1A1-204ENST00000474644 PLECQ15149 4684 aaKnown RBP11.12□□□□□ -0.63
COL1A1-204ENST00000474644 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 H3BVH4 76 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 K7EN84 100 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 M0R2P5 195 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 S100A4P26447 101 aaKnown RBP11.11□□□□□ -0.63
COL1A1-204ENST00000474644 DNLZQ5SXM8 178 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 OCC1Q8TAD7 63 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 RASL10AQ92737 203 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 SMDT1Q9H4I9 107 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 BIN3Q9NQY0 253 aa11.11□□□□□ -0.63
COL1A1-204ENST00000474644 IL36BQ9NZH7 164 aa11.1□□□□□ -0.63
COL1A1-204ENST00000474644 TENM2Q9NT68 2774 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 IGHV4-4A0A075B6R2 117 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 IGLL5B9A064 214 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 F5H768 121 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 CXCL1P09341 107 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 HOXA5P20719 270 aa11.09□□□□□ -0.63
COL1A1-204ENST00000474644 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
COL1A1-204ENST00000474644 P01737 135 aa11.08□□□□□ -0.64
COL1A1-204ENST00000474644 ARMS2P0C7Q2 107 aa11.08□□□□□ -0.64
COL1A1-204ENST00000474644 ZNF876PQ49A33 203 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms