RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 PSMB2P49721 201 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 CARD19Q96LW7 228 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 RALYQ9UKM9 306 aaKnown RBP11.26□□□□□ -0.61
SAMM50-203ENST00000474323 FABP5P3A8MUU1 101 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 TMEM262E9PQX1 116 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 UBE2D3P61077 147 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 UBE2D2P62837 147 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 CDSNQ15517 529 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 ZFAND6Q6FIF0 208 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 SS18L2Q9UHA2 77 aa11.26□□□□□ -0.61
SAMM50-203ENST00000474323 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 UBE2D1P51668 147 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 DLX6P56179 175 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 ADORA2A-AS1P86434 159 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 PRSS29PA6NIE9 313 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 NDUFB3O43676 98 aa11.25□□□□□ -0.61
SAMM50-203ENST00000474323 LGALS1P09382 135 aaKnown RBP11.25□□□□□ -0.61
SAMM50-203ENST00000474323 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 ZNF688P0C7X2 276 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 IGHV1-8P0DP01 117 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 CCL8P80075 99 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 TEX29Q8N6K0 151 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 Q8TAT8 98 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 ZNF672Q499Z4 452 aaPredicted RBP11.24□□□□□ -0.61
SAMM50-203ENST00000474323 SBSPONQ8IVN8 264 aa11.24□□□□□ -0.61
SAMM50-203ENST00000474323 TRBV20-1A0A075B6N2 111 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
SAMM50-203ENST00000474323 TMEM78Q5T7P6 136 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 OR11H6Q8NGC7 330 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 PTH2Q96A98 100 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 TMEM155Q4W5P6 130 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 NRACQ8N912 160 aa11.23□□□□□ -0.61
SAMM50-203ENST00000474323 RNASE6Q93091 150 aaKnown RBP11.23□□□□□ -0.61
SAMM50-203ENST00000474323 USP24Q9UPU5 2620 aa11.22□□□□□ -0.61
SAMM50-203ENST00000474323 ZFYVE26Q68DK2 2539 aa11.22□□□□□ -0.61
SAMM50-203ENST00000474323 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.22□□□□□ -0.61
SAMM50-203ENST00000474323 A8MWV9 139 aa11.22□□□□□ -0.61
SAMM50-203ENST00000474323 TNFRSF13BO14836 293 aaPredicted RBP11.22□□□□□ -0.61
SAMM50-203ENST00000474323 WIPF1O43516 503 aa11.22□□□□□ -0.61
SAMM50-203ENST00000474323 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
SAMM50-203ENST00000474323 IGHV1-3A0A0C4DH29 117 aa11.21□□□□□ -0.61
SAMM50-203ENST00000474323 CACNA1BQ00975 2339 aa11.21□□□□□ -0.61
SAMM50-203ENST00000474323 E7EQL1 145 aa11.21□□□□□ -0.62
SAMM50-203ENST00000474323 LOXP28300 417 aaPredicted RBP11.21□□□□□ -0.62
SAMM50-203ENST00000474323 EFNA4P52798 201 aa11.21□□□□□ -0.62
SAMM50-203ENST00000474323 FBXL19-AS1Q494R0 122 aa11.21□□□□□ -0.62
SAMM50-203ENST00000474323 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.62
SAMM50-203ENST00000474323 UFC1Q9Y3C8 167 aa11.21□□□□□ -0.62
SAMM50-203ENST00000474323 HRNRQ86YZ3 2850 aaPredicted RBP11.2□□□□□ -0.62
SAMM50-203ENST00000474323 C17orf100A8MU93 164 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 SRD5A1P18405 259 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 SRSF9Q13242 221 aaKnown RBP eCLIP11.2□□□□□ -0.62
SAMM50-203ENST00000474323 RNF5Q99942 180 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 B5MCH6 92 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 CNIH1O95406 144 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 CD3EP07766 207 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 CD7P09564 240 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 LYPD2Q6UXB3 125 aa11.2□□□□□ -0.62
SAMM50-203ENST00000474323 IGHG4P01861 327 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 SPTAN1Q13813 2472 aaKnown RBP11.19□□□□□ -0.62
SAMM50-203ENST00000474323 ZNF815PA8K554 130 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 IGLV1-47P01700 117 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 SCGB1D4Q6XE38 83 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 NEXN-AS1Q8NBZ9 246 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 PRADC1Q9BSG0 188 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 MALRD1Q5VYJ5 2156 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 DCHS2Q6V1P9 2916 aa11.19□□□□□ -0.62
SAMM50-203ENST00000474323 RHODO00212 210 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 TCL1BO95988 128 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 TRGV3P03979 118 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 NHLRC4P0CG21 123 aaPredicted RBP11.18□□□□□ -0.62
SAMM50-203ENST00000474323 SLC25A16P16260 332 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 MFAP4P55083 255 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 ORMDL2Q53FV1 153 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 SCGB3A1Q96QR1 104 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 DYNLRB1Q9NP97 96 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 CTSZQ9UBR2 303 aa11.18□□□□□ -0.62
SAMM50-203ENST00000474323 LINC01548A6NM66 108 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 ASIPP42127 132 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 TOMM6Q96B49 74 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 FLNCQ14315 2725 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 M0QXV9 152 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 SMIM2Q9BVW6 85 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 KAAG1Q9UBP8 84 aa11.17□□□□□ -0.62
SAMM50-203ENST00000474323 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
SAMM50-203ENST00000474323 IGKV3D-20A0A0C4DH25 116 aa11.16□□□□□ -0.62
SAMM50-203ENST00000474323 COX6B1P14854 86 aa11.16□□□□□ -0.62
SAMM50-203ENST00000474323 CCL17Q92583 94 aa11.16□□□□□ -0.62
SAMM50-203ENST00000474323 SMAD5-AS1Q9Y6J3 95 aa11.16□□□□□ -0.62
SAMM50-203ENST00000474323 IGHV4-4A0A075B6R2 117 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms