RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MINOS1Q5TGZ0 78 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 GDF5OSQ5U4N7 250 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 FAM78BQ5VT40 261 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 C2orf66Q6UXQ4 117 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 BRD3OSQ6XYD6 125 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SLC35E3Q7Z769 313 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 Q86TA4 180 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 LINC01551Q86U37 167 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PPP1R27Q86WC6 154 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 FAM24BQ8N5W8 94 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 C5orf56Q8N8D9 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 C15orf54Q8N8G6 183 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF709Q8N972 641 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NECAP1Q8NC96 275 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NPBQ8NG41 125 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR5AU1Q8NGC0 362 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR2T10Q8NGZ9 312 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 OR1P1Q8NH06 330 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 VSTM2AQ8TAG5 236 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PIFOQ8TCI5 191 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 RNASEH2CQ8TDP1 164 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ARPC1AQ92747 370 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BHQ93079 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TMEM186Q96B77 213 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MALSU1Q96EH3 234 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 C16orf74Q96GX8 76 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TIMD4Q96H15 378 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 VSIG2Q96IQ7 327 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 RBM14Q96PK6 669 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TRGV9Q99603 122 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BNQ99877 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 HIST1H2BMQ99879 126 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SMIM7Q9BQ49 75 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NIPSNAP3BQ9BS92 247 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PBDC1Q9BVG4 233 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MRPL32Q9BYC8 188 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SLC25A39Q9BZJ4 359 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ACTR3CQ9C0K3 210 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 COMMD5Q9GZQ3 224 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SAV1Q9H4B6 383 aaPredicted RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SMDT1Q9H4I9 107 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TUBA4BQ9H853 241 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NPVFQ9HCQ7 196 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ENY2Q9NPA8 101 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ESM1Q9NQ30 184 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 SMCO4Q9NRQ5 59 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 KCNIP2Q9NS61 270 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ZNF355PQ9NSJ1 428 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 FKBP11Q9NYL4 201 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 DPM3Q9P2X0 92 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 NAT8Q9UHE5 227 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 VAX2Q9UIW0 290 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 TBL2Q9Y4P3 447 aaKnown RBP0.97□□□□□ -2.25
CCDC39-203ENST00000473854 MINOS1-NBL1R4GNA1 71 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 URGCP-MRPS24S4R325 110 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 ARL2-SNX15V9GYD0 113 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 V9GYV3 84 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 BIRC6Q9NR09 4857 aa0.97□□□□□ -2.25
CCDC39-203ENST00000473854 PCLOQ9Y6V0 5065 aa0.96□□□□□ -2.25
CCDC39-203ENST00000473854 IGKV2D-24A0A075B6R9 120 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV3OR16-8A0A075B7F1 116 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGKV2-40A0A087WW87 121 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV8-1A0A0A6YYK1 113 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TRBV9A0A0B4J1U6 114 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TRAV8-2A0A0B4J237 113 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV1-69DA0A0B4J2H0 117 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV3-66A0A0C4DH42 116 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 A0A1B0GXF2 115 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C19orf71A6NCJ1 209 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 A6NDX4 124 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OR2T8A6NH00 312 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 OOSP1A8MZH6 123 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PPP5D1E7EU14 171 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 F6UZH7 168 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 G3V318 75 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 H3BUX3 64 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 H7BYZ3 331 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 M0R3E3 92 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 NDUFS8O00217 210 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PEX7O00628 323 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 ISLRO14498 428 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 CHEK1O14757 476 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 CYB5BO43169 146 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TGOLN2O43493 480 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 PDE6DO43924 150 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 COX7A2P2O60397 106 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 GGCTO75223 188 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 DUSP14O95147 198 aaKnown RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 CXorf1O96002 111 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGKV2D-40P01614 121 aaPredicted RBP0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGHV1-69P01742 117 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IGHG4P01861 327 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 MT-ND4LP03901 98 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TRGC2P03986 189 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TYMSP04818 313 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 IL4P05112 153 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 MSMBP08118 114 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 TRGC1P0CF51 173 aa0.96□□□□□ -2.26
CCDC39-203ENST00000473854 C8orf88P0DMB2 117 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms