RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 ZNF674Q2M3X9 581 aa13.55□□□□□ -0.24
CTDSP1-207ENST00000473420 FAM162BQ5T6X4 162 aa13.55□□□□□ -0.24
CTDSP1-207ENST00000473420 C11orf21Q9P2W6 132 aa13.55□□□□□ -0.24
CTDSP1-207ENST00000473420 CRIP1P50238 77 aa13.54□□□□□ -0.24
CTDSP1-207ENST00000473420 C12orf74Q32Q52 190 aa13.54□□□□□ -0.24
CTDSP1-207ENST00000473420 CENPWQ5EE01 88 aa13.54□□□□□ -0.24
CTDSP1-207ENST00000473420 NOP10Q9NPE3 64 aaKnown RBP13.54□□□□□ -0.24
CTDSP1-207ENST00000473420 SH2D1AO60880 128 aa13.53□□□□□ -0.24
CTDSP1-207ENST00000473420 TYMSP04818 313 aa13.53□□□□□ -0.24
CTDSP1-207ENST00000473420 GNG4P50150 75 aa13.53□□□□□ -0.24
CTDSP1-207ENST00000473420 NHLRC2Q8NBF2 726 aa13.53□□□□□ -0.24
CTDSP1-207ENST00000473420 SMDT1Q9H4I9 107 aa13.53□□□□□ -0.24
CTDSP1-207ENST00000473420 GSN-AS1Q9NRJ2 163 aa13.53□□□□□ -0.24
CTDSP1-207ENST00000473420 RAB19A4D1S5 217 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 C9JCJ5 164 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 DAD1P61803 113 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 CLLU1Q5K131 121 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 LINC00612Q8N6U2 182 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 PARLQ9H300 379 aa13.52□□□□□ -0.25
CTDSP1-207ENST00000473420 TRBV20OR9-2A0A075B6H5 130 aa13.51□□□□□ -0.25
CTDSP1-207ENST00000473420 IGHV3-16A0A0C4DH30 117 aa13.51□□□□□ -0.25
CTDSP1-207ENST00000473420 GNRH2O43555 120 aa13.51□□□□□ -0.25
CTDSP1-207ENST00000473420 Q6ZTC4 211 aa13.51□□□□□ -0.25
CTDSP1-207ENST00000473420 SPXQ9BT56 116 aa13.51□□□□□ -0.25
CTDSP1-207ENST00000473420 TRAV10A0A0B4J240 114 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 IGKV3D-20A0A0C4DH25 116 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 NUPR2A6NF83 97 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 SRP19P09132 144 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 PEA15Q15121 130 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 LINC01559Q495D7 138 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 PHLDA1Q8WV24 401 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 BIN3Q9NQY0 253 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
CTDSP1-207ENST00000473420 SPINK4O60575 86 aa13.49□□□□□ -0.25
CTDSP1-207ENST00000473420 ORM1P02763 201 aa13.49□□□□□ -0.25
CTDSP1-207ENST00000473420 LGALS9BQ3B8N2 356 aa13.49□□□□□ -0.25
CTDSP1-207ENST00000473420 CASC10Q5T4H9 136 aa13.49□□□□□ -0.25
CTDSP1-207ENST00000473420 ZFAND6Q6FIF0 208 aa13.49□□□□□ -0.25
CTDSP1-207ENST00000473420 B4DEV8 164 aa13.48□□□□□ -0.25
CTDSP1-207ENST00000473420 KRBOX1C9JBD0 128 aa13.48□□□□□ -0.25
CTDSP1-207ENST00000473420 DEFB130BP0DP73 79 aa13.48□□□□□ -0.25
CTDSP1-207ENST00000473420 DEFB130AP0DP74 79 aa13.48□□□□□ -0.25
CTDSP1-207ENST00000473420 DNLZQ5SXM8 178 aa13.48□□□□□ -0.25
CTDSP1-207ENST00000473420 CEMP1Q6PRD7 247 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-207ENST00000473420 MGST1P10620 155 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-207ENST00000473420 CEBPGP53567 150 aa13.47□□□□□ -0.25
CTDSP1-207ENST00000473420 PRR27Q6MZM9 219 aa13.47□□□□□ -0.25
CTDSP1-207ENST00000473420 C18orf15Q96N68 181 aa13.47□□□□□ -0.25
CTDSP1-207ENST00000473420 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
CTDSP1-207ENST00000473420 CSMD3Q7Z407 3707 aa13.47□□□□□ -0.25
CTDSP1-207ENST00000473420 PGPEP1LA6NFU8 196 aa13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 CXCL1P09341 107 aa13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 ASIPP42127 132 aa13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 Q6ZTI0 123 aa13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 C9orf85Q96MD7 179 aa13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 SMIM7Q9BQ49 75 aa13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 KLK5Q9Y337 293 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-207ENST00000473420 DEFB131BA0A096LNP1 70 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 TRGV1A0A0A0MS02 117 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 GAGE12BA1L429 117 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 C19orf71A6NCJ1 209 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 M0R036 132 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 GAGE7O76087 117 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 ATP5G1P05496 136 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 GAGE12FP0CL80 117 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 GAGE12GP0CL81 117 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 GAGE12IP0CL82 117 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 RNASE3P12724 160 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 SRSF3P84103 164 aaKnown RBP13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 FAM74A3Q4VXF1 159 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 OCC1Q8TAD7 63 aa13.45□□□□□ -0.26
CTDSP1-207ENST00000473420 ZNF727A8MUV8 499 aa13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 M0R2P5 195 aa13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 S100A4P26447 101 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 OR5I1Q13606 314 aa13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 RASL10AQ92737 203 aa13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 PTH2Q96A98 100 aa13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 MRPL16Q9NX20 251 aaKnown RBP13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 IL36BQ9NZH7 164 aa13.44□□□□□ -0.26
CTDSP1-207ENST00000473420 C9JQL5 133 aa13.43□□□□□ -0.26
CTDSP1-207ENST00000473420 ZNF575Q86XF7 245 aa13.43□□□□□ -0.26
CTDSP1-207ENST00000473420 NDUFAF3Q9BU61 184 aa13.43□□□□□ -0.26
CTDSP1-207ENST00000473420 TRGV2A0A075B6R0 118 aa13.42□□□□□ -0.26
CTDSP1-207ENST00000473420 K7EN84 100 aa13.42□□□□□ -0.26
CTDSP1-207ENST00000473420 STARD9Q9P2P6 4700 aa13.42□□□□□ -0.26
CTDSP1-207ENST00000473420 MUC4Q99102 2169 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 TMSB15BA0A087X1C1 80 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 GRIFINA4D1Z8 144 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 P01737 135 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 MED14OSP0DP75 135 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 TCTAP57738 103 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
CTDSP1-207ENST00000473420 H3BVH4 76 aa13.4□□□□□ -0.26
CTDSP1-207ENST00000473420 HTN3P15516 51 aa13.4□□□□□ -0.26
CTDSP1-207ENST00000473420 RPS20P60866 119 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-207ENST00000473420 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
CTDSP1-207ENST00000473420 PIK3CD-AS1Q5SR53 167 aa13.4□□□□□ -0.26
CTDSP1-207ENST00000473420 LINC01551Q86U37 167 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms