RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PTH2Q96A98 100 aa9.16□□□□□ -0.94
CHD3-209ENST00000473376 SDF2L1Q9HCN8 221 aa9.16□□□□□ -0.94
CHD3-209ENST00000473376 A0A1W2PPV4 95 aa9.15□□□□□ -0.94
CHD3-209ENST00000473376 FBLL1A6NHQ2 334 aaKnown RBP9.15□□□□□ -0.94
CHD3-209ENST00000473376 SFTA3P0C7M3 94 aa9.15□□□□□ -0.94
CHD3-209ENST00000473376 LINC01556Q5JQF7 62 aa9.15□□□□□ -0.94
CHD3-209ENST00000473376 WFDC10BQ8IUB3 73 aa9.15□□□□□ -0.94
CHD3-209ENST00000473376 SH3BGRL3Q9H299 93 aa9.15□□□□□ -0.94
CHD3-209ENST00000473376 IGHV3-38A0A0C4DH36 116 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 TRBV6-4A0A1B0GX49 114 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 CRYGDP07320 174 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 GATA1P15976 413 aaPredicted RBP9.14□□□□□ -0.95
CHD3-209ENST00000473376 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 SUN5Q8TC36 379 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 TREM1Q9NP99 234 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 TNFRSF18Q9Y5U5 241 aa9.14□□□□□ -0.95
CHD3-209ENST00000473376 K7EQM0 130 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 GCSHP23434 173 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 DEFA1P59665 94 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 DEFA3P59666 94 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 OR2G3Q8NGZ4 309 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 ASB13Q8WXK3 278 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 FRZBQ92765 325 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 HYLS1Q96M11 299 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 NDFIP1Q9BT67 221 aa9.13□□□□□ -0.95
CHD3-209ENST00000473376 TRAV8-6A0A0B4J262 113 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 IBA57-AS1B1ANH7 110 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 TAAR5O14804 337 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 GNRH2O43555 120 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 SSNA1O43805 119 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 C1QBP02746 253 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 TYMSP04818 313 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 IFITM3Q01628 133 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 LAGE3Q14657 143 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 GOLT1AQ6ZVE7 132 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 C5orf17Q8NAS9 161 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 TVP23CQ96ET8 276 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 PRADC1Q9BSG0 188 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
CHD3-209ENST00000473376 MBP02144 154 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 STAG3L2P0CL84 134 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 STAG3L3P0CL85 134 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
CHD3-209ENST00000473376 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 SERF2P84101 59 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 RHOHQ15669 191 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 OR10G9Q8NGN4 311 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 OR10G7Q8NGN6 311 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 PSMG3Q9BT73 122 aaPredicted RBP9.11□□□□□ -0.95
CHD3-209ENST00000473376 NAGKQ9UJ70 344 aa9.11□□□□□ -0.95
CHD3-209ENST00000473376 LRCOL1A6NCL2 159 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 RS1O15537 224 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 PPT1P50897 306 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 LELP1Q5T871 98 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 C9orf85Q96MD7 179 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 WFDC1Q9HC57 220 aa9.1□□□□□ -0.95
CHD3-209ENST00000473376 TCRAP04437 139 aa9.09□□□□□ -0.95
CHD3-209ENST00000473376 SAPCD1Q5SSQ6 148 aa9.09□□□□□ -0.95
CHD3-209ENST00000473376 Q5VSD8 79 aa9.09□□□□□ -0.95
CHD3-209ENST00000473376 CFAP126Q5VTH2 177 aa9.09□□□□□ -0.95
CHD3-209ENST00000473376 NHLRC2Q8NBF2 726 aa9.09□□□□□ -0.95
CHD3-209ENST00000473376 SMIM3Q9BZL3 60 aa9.09□□□□□ -0.95
CHD3-209ENST00000473376 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 A6NHS1 94 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 PSCAO43653 123 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 CDC34P49427 236 aaPredicted RBP9.08□□□□□ -0.96
CHD3-209ENST00000473376 ZFP69Q49AA0 526 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 ZFP2Q6ZN57 461 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 GTSF1LQ9H1H1 148 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 TMEM167BQ9NRX6 74 aa9.08□□□□□ -0.96
CHD3-209ENST00000473376 LOC100131303A0A0U1RQF7 123 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 FAM229AH3BQW9 127 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 ARL14EPLP0DKL9 152 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 RAB2AP61019 212 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 SMUG1Q53HV7 270 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 Q8N814 137 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 RAB24Q969Q5 203 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 AQP10Q96PS8 301 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 TM2D2Q9BX73 214 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 RPH3ALQ9UNE2 315 aa9.07□□□□□ -0.96
CHD3-209ENST00000473376 IGLV5-52A0A0A0MRZ9 124 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 A0A1W2PRE2 83 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 A8MWV9 139 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 F6UZH7 168 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 CXorf1O96002 111 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 GCHFRP30047 84 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 FLI1Q01543 452 aaPredicted RBP9.06□□□□□ -0.96
CHD3-209ENST00000473376 OR10J3Q5JRS4 329 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 CYB561D1Q8N8Q1 229 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 EPDR1Q9UM22 224 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 TNFSF18Q9UNG2 199 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 PSG8Q9UQ74 426 aa9.06□□□□□ -0.96
CHD3-209ENST00000473376 DMBT1Q9UGM3 2413 aaPredicted RBP9.06□□□□□ -0.96
CHD3-209ENST00000473376 A0A087WWC5 75 aa9.05□□□□□ -0.96
CHD3-209ENST00000473376 GCGP01275 180 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms