RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SDF2L1Q9HCN8 221 aa15.6■□□□□ 0.09
PTP4A1-203ENST00000473334 MRPS16Q9Y3D3 137 aaKnown RBP15.6■□□□□ 0.09
PTP4A1-203ENST00000473334 IGHV3-16A0A0C4DH30 117 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 FBLL1A6NHQ2 334 aaKnown RBP15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 IGLV2-11P01706 119 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 TYMSP04818 313 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 FHL2Q14192 279 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 C8orf49Q96NF6 230 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 HHLA3Q9XRX5 114 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 ICOSQ9Y6W8 199 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 PKD1P98161 4303 aa15.59■□□□□ 0.09
PTP4A1-203ENST00000473334 CRYBA4P53673 196 aa15.58■□□□□ 0.08
PTP4A1-203ENST00000473334 FGF8P55075 233 aaPredicted RBP15.58■□□□□ 0.08
PTP4A1-203ENST00000473334 ZNF345Q14585 488 aa15.58■□□□□ 0.08
PTP4A1-203ENST00000473334 ZFP69Q49AA0 526 aa15.58■□□□□ 0.08
PTP4A1-203ENST00000473334 PRNTQ86SH4 94 aa15.58■□□□□ 0.08
PTP4A1-203ENST00000473334 PKHD1P08F94 4074 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 TRGV4A0A0C4DH28 118 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 M0R2P5 195 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 GCGP01275 180 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 ZNF80P51504 273 aaPredicted RBP15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 UBE2G2P60604 165 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 SMUG1Q53HV7 270 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 C6orf223Q8N319 242 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 KCNRGQ8N5I3 272 aa15.57■□□□□ 0.08
PTP4A1-203ENST00000473334 MAP1LC3B2A6NCE7 125 aa15.56■□□□□ 0.08
PTP4A1-203ENST00000473334 SFTA3P0C7M3 94 aa15.56■□□□□ 0.08
PTP4A1-203ENST00000473334 TTC32Q5I0X7 151 aa15.56■□□□□ 0.08
PTP4A1-203ENST00000473334 ZNF479Q96JC4 524 aa15.56■□□□□ 0.08
PTP4A1-203ENST00000473334 MAP1LC3BQ9GZQ8 125 aa15.56■□□□□ 0.08
PTP4A1-203ENST00000473334 TRAV4A0A0B4J268 109 aa15.55■□□□□ 0.08
PTP4A1-203ENST00000473334 HMSDA8MTL9 139 aa15.55■□□□□ 0.08
PTP4A1-203ENST00000473334 IFNA7P01567 189 aa15.55■□□□□ 0.08
PTP4A1-203ENST00000473334 PFN1P07737 140 aaKnown RBP15.55■□□□□ 0.08
PTP4A1-203ENST00000473334 SAPCD1Q5SSQ6 148 aa15.55■□□□□ 0.08
PTP4A1-203ENST00000473334 NKX6-2Q9C056 277 aaPredicted RBP15.55■□□□□ 0.08
PTP4A1-203ENST00000473334 FAM74A7A6NL05 159 aa15.54■□□□□ 0.08
PTP4A1-203ENST00000473334 PPT1P50897 306 aa15.54■□□□□ 0.08
PTP4A1-203ENST00000473334 OR11H4Q8NGC9 324 aa15.54■□□□□ 0.08
PTP4A1-203ENST00000473334 C11orf21Q9P2W6 132 aa15.54■□□□□ 0.08
PTP4A1-203ENST00000473334 PEX7O00628 323 aa15.53■□□□□ 0.08
PTP4A1-203ENST00000473334 MRPL23Q16540 153 aaKnown RBP15.53■□□□□ 0.08
PTP4A1-203ENST00000473334 LINC00479Q96M42 142 aa15.53■□□□□ 0.08
PTP4A1-203ENST00000473334 TRAV34A0A0B4J273 112 aa15.52■□□□□ 0.08
PTP4A1-203ENST00000473334 A0A0D9SG52 128 aa15.52■□□□□ 0.08
PTP4A1-203ENST00000473334 OR4C5Q8NGB2 326 aa15.52■□□□□ 0.08
PTP4A1-203ENST00000473334 HIST1H2BAQ96A08 127 aa15.52■□□□□ 0.08
PTP4A1-203ENST00000473334 A0A1W2PPQ1 181 aa15.51■□□□□ 0.07
PTP4A1-203ENST00000473334 STOML3Q8TAV4 291 aa15.51■□□□□ 0.07
PTP4A1-203ENST00000473334 KRTAP1-5Q9BYS1 174 aa15.51■□□□□ 0.07
PTP4A1-203ENST00000473334 ARL2-SNX15V9GYD0 113 aa15.51■□□□□ 0.07
PTP4A1-203ENST00000473334 DYNC1H1Q14204 4646 aaKnown RBP15.51■□□□□ 0.07
PTP4A1-203ENST00000473334 HERC2O95714 4834 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 KANTRA0A1W2PQU2 76 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 BCL2L11O43521 198 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 SEC11BP0C7V7 166 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 FHITP49789 147 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 Q86TA4 180 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 PCNPQ8WW12 178 aaKnown RBP15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 DNAH11Q96DT5 4516 aa15.5■□□□□ 0.07
PTP4A1-203ENST00000473334 ORM1P02763 201 aa15.49■□□□□ 0.07
PTP4A1-203ENST00000473334 TNP2Q05952 138 aa15.49■□□□□ 0.07
PTP4A1-203ENST00000473334 NEGR1Q7Z3B1 354 aa15.49■□□□□ 0.07
PTP4A1-203ENST00000473334 ZNF471Q9BX82 626 aaPredicted RBP15.49■□□□□ 0.07
PTP4A1-203ENST00000473334 C9JCJ5 164 aa15.48■□□□□ 0.07
PTP4A1-203ENST00000473334 K7EQD1 137 aa15.48■□□□□ 0.07
PTP4A1-203ENST00000473334 GYPEP15421 78 aa15.48■□□□□ 0.07
PTP4A1-203ENST00000473334 SRIP30626 198 aa15.48■□□□□ 0.07
PTP4A1-203ENST00000473334 LYPD5Q6UWN5 251 aa15.48■□□□□ 0.07
PTP4A1-203ENST00000473334 C9orf85Q96MD7 179 aa15.48■□□□□ 0.07
PTP4A1-203ENST00000473334 UMAD1C9J7I0 102 aa15.47■□□□□ 0.07
PTP4A1-203ENST00000473334 SIVA1O15304 175 aa15.47■□□□□ 0.07
PTP4A1-203ENST00000473334 NXPH4O95158 308 aa15.47■□□□□ 0.07
PTP4A1-203ENST00000473334 ZNF876PQ49A33 203 aa15.47■□□□□ 0.07
PTP4A1-203ENST00000473334 TCEAL7Q9BRU2 100 aa15.47■□□□□ 0.07
PTP4A1-203ENST00000473334 KIAA1109Q2LD37 5005 aa15.46■□□□□ 0.07
PTP4A1-203ENST00000473334 FABP5P3A8MUU1 101 aa15.46■□□□□ 0.07
PTP4A1-203ENST00000473334 CST9LP1Q5W188 147 aa15.46■□□□□ 0.07
PTP4A1-203ENST00000473334 FAM213BQ8TBF2 198 aa15.46■□□□□ 0.07
PTP4A1-203ENST00000473334 FMC1Q96HJ9 113 aa15.46■□□□□ 0.07
PTP4A1-203ENST00000473334 RNASE3P12724 160 aaKnown RBP15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 GATA1P15976 413 aaPredicted RBP15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 BTF3P20290 206 aaKnown RBP15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 EIF5AP63241 154 aaKnown RBP15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 MBD3L1Q8WWY6 194 aa15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 PTH2Q96A98 100 aa15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 TXNDC17Q9BRA2 123 aa15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 ZFP30Q9Y2G7 519 aa15.45■□□□□ 0.06
PTP4A1-203ENST00000473334 IGKV3D-20A0A0C4DH25 116 aa15.44■□□□□ 0.06
PTP4A1-203ENST00000473334 RS1O15537 224 aa15.44■□□□□ 0.06
PTP4A1-203ENST00000473334 UBE2G1P62253 170 aa15.44■□□□□ 0.06
PTP4A1-203ENST00000473334 SFT2D1Q8WV19 159 aa15.44■□□□□ 0.06
PTP4A1-203ENST00000473334 PGPEP1LA6NFU8 196 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 CIDEAO60543 219 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 PFDN1O60925 122 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 ZNF506Q5JVG8 444 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 CFAP126Q5VTH2 177 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 DPPA3Q6W0C5 159 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 TMUB2Q71RG4 321 aa15.43■□□□□ 0.06
PTP4A1-203ENST00000473334 COX8CQ7Z4L0 72 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms