RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 PRNTQ86SH4 94 aa11.84□□□□□ -0.51
COMMD3-210ENST00000472610 OR11H4Q8NGC9 324 aa11.84□□□□□ -0.51
COMMD3-210ENST00000472610 MAP1LC3BQ9GZQ8 125 aa11.84□□□□□ -0.51
COMMD3-210ENST00000472610 IGHV3-16A0A0C4DH30 117 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 KANTRA0A1W2PQU2 76 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 RTL8CO15255 209 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 IGHV3-53P01767 116 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 TYMSP04818 313 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 FGF8P55075 233 aaPredicted RBP11.83□□□□□ -0.52
COMMD3-210ENST00000472610 UBE2G2P60604 165 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 EIF5AP63241 154 aaKnown RBP11.83□□□□□ -0.52
COMMD3-210ENST00000472610 C1orf134Q5TEV5 83 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 HIST1H2BAQ96A08 127 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 HHLA3Q9XRX5 114 aa11.83□□□□□ -0.52
COMMD3-210ENST00000472610 A0A096LPF7 62 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 TRGV4A0A0C4DH28 118 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 NBDYA0A0U1RRE5 68 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 PRSS29PA6NIE9 313 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 FAM74A7A6NL05 159 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 UMAD1C9J7I0 102 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 M0R2P5 195 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 GCGP01275 180 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 PFN1P07737 140 aaKnown RBP11.82□□□□□ -0.52
COMMD3-210ENST00000472610 FHL2Q14192 279 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 ESRGQ1W209 222 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 UPK3BQ9BT76 320 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 Q9H8V8 135 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 ICOSQ9Y6W8 199 aa11.82□□□□□ -0.52
COMMD3-210ENST00000472610 BCL2L11O43521 198 aa11.81□□□□□ -0.52
COMMD3-210ENST00000472610 ZNF80P51504 273 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-210ENST00000472610 CRYBA4P53673 196 aa11.81□□□□□ -0.52
COMMD3-210ENST00000472610 ZNF471Q9BX82 626 aaPredicted RBP11.81□□□□□ -0.52
COMMD3-210ENST00000472610 MRPS16Q9Y3D3 137 aaKnown RBP11.81□□□□□ -0.52
COMMD3-210ENST00000472610 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
COMMD3-210ENST00000472610 TRAV4A0A0B4J268 109 aa11.8□□□□□ -0.52
COMMD3-210ENST00000472610 PEX7O00628 323 aa11.8□□□□□ -0.52
COMMD3-210ENST00000472610 FHITP49789 147 aa11.8□□□□□ -0.52
COMMD3-210ENST00000472610 TCEAL7Q9BRU2 100 aa11.8□□□□□ -0.52
COMMD3-210ENST00000472610 ARL2-SNX15V9GYD0 113 aa11.8□□□□□ -0.52
COMMD3-210ENST00000472610 FRAS1Q86XX4 4008 aa11.79□□□□□ -0.52
COMMD3-210ENST00000472610 TRAV34A0A0B4J273 112 aa11.79□□□□□ -0.52
COMMD3-210ENST00000472610 MRPL23Q16540 153 aaKnown RBP11.79□□□□□ -0.52
COMMD3-210ENST00000472610 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
COMMD3-210ENST00000472610 ZNF479Q96JC4 524 aa11.79□□□□□ -0.52
COMMD3-210ENST00000472610 LINC00479Q96M42 142 aa11.79□□□□□ -0.52
COMMD3-210ENST00000472610 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 PFDN1O60925 122 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 TTC32Q5I0X7 151 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 TMUB2Q71RG4 321 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 MBD3L1Q8WWY6 194 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 C11orf21Q9P2W6 132 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 ZFP30Q9Y2G7 519 aa11.78□□□□□ -0.52
COMMD3-210ENST00000472610 A0A1B0GVY2 172 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 CIDEAO60543 219 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 ORM1P02763 201 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
COMMD3-210ENST00000472610 CST9LP1Q5W188 147 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 C6orf223Q8N319 242 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 FAM213BQ8TBF2 198 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 SFT2D1Q8WV19 159 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 FMC1Q96HJ9 113 aa11.77□□□□□ -0.53
COMMD3-210ENST00000472610 A0A1W2PPQ1 181 aa11.76□□□□□ -0.53
COMMD3-210ENST00000472610 UBE2G1P62253 170 aa11.76□□□□□ -0.53
COMMD3-210ENST00000472610 LGALSLQ3ZCW2 172 aaPredicted RBP11.76□□□□□ -0.53
COMMD3-210ENST00000472610 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
COMMD3-210ENST00000472610 NEGR1Q7Z3B1 354 aa11.76□□□□□ -0.53
COMMD3-210ENST00000472610 Q86TA4 180 aa11.76□□□□□ -0.53
COMMD3-210ENST00000472610 PCNPQ8WW12 178 aaKnown RBP11.76□□□□□ -0.53
COMMD3-210ENST00000472610 PTH2Q96A98 100 aa11.76□□□□□ -0.53
COMMD3-210ENST00000472610 TRBV6-1A0A0K0K1D8 114 aa11.75□□□□□ -0.53
COMMD3-210ENST00000472610 C9JCJ5 164 aa11.75□□□□□ -0.53
COMMD3-210ENST00000472610 COX8CQ7Z4L0 72 aa11.75□□□□□ -0.53
COMMD3-210ENST00000472610 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
COMMD3-210ENST00000472610 PAGE4O60829 102 aa11.74□□□□□ -0.53
COMMD3-210ENST00000472610 H2AFB1P0C5Y9 115 aa11.74□□□□□ -0.53
COMMD3-210ENST00000472610 SRIP30626 198 aa11.74□□□□□ -0.53
COMMD3-210ENST00000472610 LYPD5Q6UWN5 251 aa11.74□□□□□ -0.53
COMMD3-210ENST00000472610 TCTE3Q8IZS6 198 aa11.74□□□□□ -0.53
COMMD3-210ENST00000472610 K7EQD1 137 aa11.73□□□□□ -0.53
COMMD3-210ENST00000472610 SIVA1O15304 175 aa11.73□□□□□ -0.53
COMMD3-210ENST00000472610 GYPEP15421 78 aa11.73□□□□□ -0.53
COMMD3-210ENST00000472610 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
COMMD3-210ENST00000472610 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
COMMD3-210ENST00000472610 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
COMMD3-210ENST00000472610 TXNDC17Q9BRA2 123 aa11.73□□□□□ -0.53
COMMD3-210ENST00000472610 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
COMMD3-210ENST00000472610 RS1O15537 224 aa11.72□□□□□ -0.53
COMMD3-210ENST00000472610 S100A9P06702 114 aaKnown RBP11.72□□□□□ -0.53
COMMD3-210ENST00000472610 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
COMMD3-210ENST00000472610 AKR1C3P42330 323 aa11.72□□□□□ -0.53
COMMD3-210ENST00000472610 RAB5CP51148 216 aa11.72□□□□□ -0.53
COMMD3-210ENST00000472610 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
COMMD3-210ENST00000472610 PGPEP1LA6NFU8 196 aa11.71□□□□□ -0.53
COMMD3-210ENST00000472610 NXPH4O95158 308 aa11.71□□□□□ -0.53
COMMD3-210ENST00000472610 LTAP01374 205 aa11.71□□□□□ -0.53
COMMD3-210ENST00000472610 GATA1P15976 413 aaPredicted RBP11.71□□□□□ -0.53
COMMD3-210ENST00000472610 ASIPP42127 132 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms