RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 FGF7P21781 194 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 ASIPP42127 132 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 HNRNPA3P51991 378 aaKnown RBP6.11□□□□□ -1.43
VCL-204ENST00000472585 VAMP2P63027 116 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 BAXQ07812 192 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 ASAH1Q13510 395 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 TDRG1Q3Y452 100 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 SLC25A29Q8N8R3 303 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 OR4C5Q8NGB2 326 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 TVP23CQ96ET8 276 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 DNAJC30Q96LL9 226 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 CHAC1Q9BUX1 264 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 TM2D2Q9BX73 214 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 C20orf85Q9H1P6 137 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 AAMDCQ9H7C9 122 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 Q9UF83 564 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 LRP2P98164 4655 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 PKHD1L1Q86WI1 4243 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 NAP1L6A6NFF2 107 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 EIF3GO75821 320 aaKnown RBP eCLIP6.1□□□□□ -1.43
VCL-204ENST00000472585 S100A11P31949 105 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 SULT1A1P50225 295 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 LINC00310P59036 64 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 RPL37AP61513 92 aaKnown RBP6.1□□□□□ -1.43
VCL-204ENST00000472585 RANP62826 216 aaKnown RBP6.1□□□□□ -1.43
VCL-204ENST00000472585 ZNF846Q147U1 533 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 NHLRC2Q8NBF2 726 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 CIRBP-AS1Q8TBR5 109 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 NPCDR1Q9BY65 106 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 OR51M1Q9H341 326 aa6.1□□□□□ -1.43
VCL-204ENST00000472585 GPN1Q9HCN4 374 aaPredicted RBP6.1□□□□□ -1.43
VCL-204ENST00000472585 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
VCL-204ENST00000472585 FAM25EA8MYX2 175 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 M0R2P5 195 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 PLA2G10O15496 165 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 IGLV2-8P01709 118 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 PPT1P50897 306 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 NHLH2Q02577 135 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 OR10J3Q5JRS4 329 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 DAZ4Q86SG3 579 aaKnown RBP6.09□□□□□ -1.43
VCL-204ENST00000472585 BAALCQ8WXS3 180 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 SEC22CQ9BRL7 303 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 DAZ3Q9NR90 486 aaKnown RBP6.09□□□□□ -1.43
VCL-204ENST00000472585 C11orf21Q9P2W6 132 aa6.09□□□□□ -1.43
VCL-204ENST00000472585 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 IGHV3-73A0A0B4J1V6 119 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 TRAV8-6A0A0B4J262 113 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 RBAKDNA6NC62 111 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 RBFOX3A6NFN3 312 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 DIRC3C9JPN6 131 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 TYMSP04818 313 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 MT1HL1P0DM35 61 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 RAB32Q13637 225 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 LELP1Q5T871 98 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 CFAP126Q5VTH2 177 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 FAM159AQ6UWV7 190 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 SH2D6Q7Z4S9 175 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 THAP6Q8TBB0 222 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 DAZAP1Q96EP5 407 aaKnown RBP6.08□□□□□ -1.44
VCL-204ENST00000472585 C2orf50Q96LR7 162 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 PAXXQ9BUH6 204 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 NAGKQ9UJ70 344 aa6.08□□□□□ -1.44
VCL-204ENST00000472585 RNF222A6NCQ9 220 aa6.07□□□□□ -1.44
VCL-204ENST00000472585 C5orf51A6NDU8 294 aa6.07□□□□□ -1.44
VCL-204ENST00000472585 PFN1P07737 140 aaKnown RBP6.07□□□□□ -1.44
VCL-204ENST00000472585 S100A5P33763 92 aa6.07□□□□□ -1.44
VCL-204ENST00000472585 GTSF1LQ9H1H1 148 aa6.07□□□□□ -1.44
VCL-204ENST00000472585 TRAV8-1A0A0A6YYK1 113 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 TRBV6-4A0A1B0GX49 114 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 FBLL1A6NHQ2 334 aaKnown RBP6.06□□□□□ -1.44
VCL-204ENST00000472585 F6UZH7 168 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 LINC00694P0DN24 101 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
VCL-204ENST00000472585 LAGE3Q14657 143 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 ATP6V1FQ16864 119 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 TRIQKQ629K1 86 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 RBM38Q9H0Z9 239 aaKnown RBP6.06□□□□□ -1.44
VCL-204ENST00000472585 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
VCL-204ENST00000472585 TRAV6A0A075B6T7 132 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 PGPEP1LA6NFU8 196 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 H0YIZ8 118 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 IGLV2-11P01706 119 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 TCRBP04435 133 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 IL7P13232 177 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 S100A10P60903 97 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 ZNF876PQ49A33 203 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 OR5C1Q8NGR4 320 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 ATP6V0E2Q8NHE4 81 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 TMED6Q8WW62 240 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 HYLS1Q96M11 299 aa6.05□□□□□ -1.44
VCL-204ENST00000472585 TRAV8-3A0A0A6YYJ7 113 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 PGPA6NDG6 321 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 OR7C2O60412 319 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 NOL3O60936 208 aaKnown RBP6.04□□□□□ -1.44
VCL-204ENST00000472585 CSN1S1P47710 185 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 INPP1P49441 399 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 HBG1P69891 147 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 HBG2P69892 147 aa6.04□□□□□ -1.44
VCL-204ENST00000472585 SPANXN2Q5MJ10 180 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms