RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 FOXE3Q13461 319 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 FOXI2Q6ZQN5 318 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 ALPK3Q96L96 1907 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 WI2-2373I1.2A0A1W2PRP0 233 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 GAGE12JA6NER3 117 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 GAGE4Q13068 117 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 GAGE5Q13069 117 aa10.14□□□□□ -0.79
PCCB-210ENST00000471595 TCF15Q12870 199 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 USF3Q68DE3 2245 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 IGKV1OR2-108A0A075B7D4 117 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 ETDBQ3ZM63 59 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 CRIP3Q6Q6R5 217 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 C12orf74Q32Q52 190 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 DOCK10Q96BY6 2186 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 GTF3C1Q12789 2109 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 CADP27708 2225 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 PRSS29PA6NIE9 313 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 TEX22C9J3V5 150 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 CTSGP08311 255 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 INAFM2P0DMQ5 153 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 COL6A6A6NMZ7 2263 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 DENND4AQ7Z401 1863 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 A0A1W2PNU3 283 aaPredicted RBP10.13□□□□□ -0.79
PCCB-210ENST00000471595 CRYGCP07315 174 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
PCCB-210ENST00000471595 IGHV3-16A0A0C4DH30 117 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 FGF6P10767 208 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 TSSC4Q9Y5U2 329 aaPredicted RBP10.12□□□□□ -0.79
PCCB-210ENST00000471595 IGLV1-47P01700 117 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 GTSF1Q8WW33 167 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 LAMTOR3Q9UHA4 124 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 SCRT2Q9NQ03 307 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
PCCB-210ENST00000471595 MALRD1Q5VYJ5 2156 aa10.12□□□□□ -0.79
PCCB-210ENST00000471595 HERVK_113P63121 156 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 EML6Q6ZMW3 1958 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 GNRH2O43555 120 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 ZNF625Q96I27 306 aaPredicted RBP10.11□□□□□ -0.79
PCCB-210ENST00000471595 NCKAP5O14513 1909 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 K7ERJ3 54 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 BUB3O43684 328 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 Q6ZPA2 131 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 PCP2Q8IVA1 136 aa10.11□□□□□ -0.79
PCCB-210ENST00000471595 GAGE2AQ6NT46 116 aa10.1□□□□□ -0.79
PCCB-210ENST00000471595 SPANXDQ9BXN6 97 aa10.1□□□□□ -0.79
PCCB-210ENST00000471595 HIST1H4AP62805 103 aaKnown RBP10.1□□□□□ -0.79
PCCB-210ENST00000471595 TDRG1Q3Y452 100 aa10.1□□□□□ -0.79
PCCB-210ENST00000471595 LINC00574Q9H8X3 128 aa10.1□□□□□ -0.79
PCCB-210ENST00000471595 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
PCCB-210ENST00000471595 F6UB75 175 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 H3BMG7 143 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 LINC00173Q6ZV60 143 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 Q96MF0 132 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
PCCB-210ENST00000471595 Q8N9W7 124 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 MAPK1IP1LQ8NDC0 245 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
PCCB-210ENST00000471595 GATA1P15976 413 aaPredicted RBP10.08□□□□□ -0.8
PCCB-210ENST00000471595 IGHV3-38A0A0C4DH36 116 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 MSMPQ1L6U9 139 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 CTRLP40313 264 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 E7EUB6 86 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 CGB3P0DN86 165 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 CGB7P0DN87 165 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 ZNF295-AS1Q8N0V1 137 aa10.08□□□□□ -0.8
PCCB-210ENST00000471595 C19orf71A6NCJ1 209 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 VWC2LB2RUY7 222 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 C9orf47Q6ZRZ4 202 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 MRPL36Q9P0J6 103 aaKnown RBP10.07□□□□□ -0.8
PCCB-210ENST00000471595 GAGE7O76087 117 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 GAGE12FP0CL80 117 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 GAGE12GP0CL81 117 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 GAGE12IP0CL82 117 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 ANKRD39Q53RE8 183 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 UTF1Q5T230 341 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 SOCS3O14543 225 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 DEFB112Q30KQ8 113 aa10.07□□□□□ -0.8
PCCB-210ENST00000471595 CFHR3Q02985 330 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 ZNF503Q96F45 646 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 CCL25O15444 150 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 HOXD3P31249 432 aaPredicted RBP10.06□□□□□ -0.8
PCCB-210ENST00000471595 NCOA6Q14686 2063 aaPredicted RBP10.06□□□□□ -0.8
PCCB-210ENST00000471595 C5orf56Q8N8D9 126 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 RNF152Q8N8N0 203 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 MSRB1Q9NZV6 116 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 HIGD1BQ9P298 99 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 EIF4EBP1Q13541 118 aaPredicted RBP10.06□□□□□ -0.8
PCCB-210ENST00000471595 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
PCCB-210ENST00000471595 IGHV4-59P01825 116 aa10.05□□□□□ -0.8
PCCB-210ENST00000471595 PCNX2A6NKB5 2137 aa10.05□□□□□ -0.8
PCCB-210ENST00000471595 SUMO4Q6EEV6 95 aa10.05□□□□□ -0.8
PCCB-210ENST00000471595 Q8N7P7 452 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms