RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CTXN2P0C2S0 81 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 MIFP14174 115 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 HIST1H1DP16402 221 aaKnown RBP3.29□□□□□ -1.88
CKS1B-204ENST00000471245 M6PRP20645 277 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 NPY1RP25929 384 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 FABP5Q01469 135 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 C12orf74Q32Q52 190 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 Q5VSD8 79 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 BPIFB6Q8NFQ5 453 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 GINS4Q9BRT9 223 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 ARL6Q9H0F7 186 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 UFC1Q9Y3C8 167 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 FAT3Q8TDW7 4589 aa3.29□□□□□ -1.88
CKS1B-204ENST00000471245 LRP1Q07954 4544 aaKnown RBP3.29□□□□□ -1.88
CKS1B-204ENST00000471245 HMCN2Q8NDA2 5059 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 IGKV3-7A0A075B6H7 116 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 TRAV8-2A0A0B4J237 113 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 LOC389332A0A1B0GUA5 103 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 PGPA6NDG6 321 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 K7EIM0 57 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 CTSGP08311 255 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 HIST1H1BP16401 226 aaKnown RBP3.28□□□□□ -1.88
CKS1B-204ENST00000471245 CRHBPP24387 322 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 WT1-ASQ06250 92 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 OGFRL1Q5TC84 451 aaPredicted RBP3.28□□□□□ -1.88
CKS1B-204ENST00000471245 PRNTQ86SH4 94 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 C10orf67Q8IYJ2 551 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 LYPD1Q8N2G4 141 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 ORAOV1Q8WV07 137 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 SMIM12Q96EX1 92 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 MND1Q9BWT6 205 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 DAZ1Q9NQZ3 744 aaKnown RBP3.28□□□□□ -1.88
CKS1B-204ENST00000471245 BET1LQ9NYM9 111 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 TAS2R8Q9NYW2 309 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 SMPXQ9UHP9 88 aa3.28□□□□□ -1.88
CKS1B-204ENST00000471245 RBM7Q9Y580 266 aaKnown RBP3.28□□□□□ -1.88
CKS1B-204ENST00000471245 TEX50A0A1B0GTY4 177 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 C7orf66A4D0T2 115 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 LRCOL1A6NCL2 159 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 C8orf87E5RJ46 101 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 M0R036 132 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 NDUFA4O00483 81 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 SSNA1O43805 119 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 CREBL2O60519 120 aaPredicted RBP3.27□□□□□ -1.89
CKS1B-204ENST00000471245 MRPS14O60783 128 aaKnown RBP3.27□□□□□ -1.89
CKS1B-204ENST00000471245 DEFA4P12838 97 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
CKS1B-204ENST00000471245 LINC00315P59091 139 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 SSX1Q16384 188 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 FAM231DQ6ZW35 169 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 C8orf59Q8N0T1 100 aaPredicted RBP3.27□□□□□ -1.89
CKS1B-204ENST00000471245 SLC25A29Q8N8R3 303 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 GDPD1Q8N9F7 314 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 PACRGQ96M98 296 aaPredicted RBP3.27□□□□□ -1.89
CKS1B-204ENST00000471245 RHPN1-AS1Q9BWJ2 59 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 C21orf62Q9NYP8 219 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 PRELID3BQ9Y3B1 194 aa3.27□□□□□ -1.89
CKS1B-204ENST00000471245 NBDYA0A0U1RRE5 68 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 TMEM235A6NFC5 223 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 IFITM5A6NNB3 132 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 I3L2K1 104 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 DHFRP00374 187 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 HRASP01112 189 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 OR13C7P0DN81 318 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 CD36P16671 472 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 AKR1C4P17516 323 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 CEBPGP53567 150 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 HACD4Q5VWC8 232 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 MORN3Q6PF18 240 aaPredicted RBP3.26□□□□□ -1.89
CKS1B-204ENST00000471245 PACRGLQ8N7B6 248 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 GATD1Q8NB37 220 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 VSTM2AQ8TAG5 236 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 DUSP21Q9H596 190 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 NDUFA4L2Q9NRX3 87 aa3.26□□□□□ -1.89
CKS1B-204ENST00000471245 PKHD1L1Q86WI1 4243 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TRAV1-2A0A0B4J238 106 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TMEM250H0YL14 139 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 ARL6IP5O75915 188 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TRAPPC2P0DI81 140 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TRAPPC2BP0DI82 140 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 GADD45AP24522 165 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 DEFB131AP59861 70 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 FAM222AQ5U5X8 452 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TOMM20LQ6UXN7 152 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 ZNF818PQ6ZRF7 136 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TCF24Q7RTU0 167 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 OR51H1Q8NH63 302 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 PPP1R14BQ96C90 147 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 DGCR14Q96DF8 476 aaKnown RBP3.25□□□□□ -1.89
CKS1B-204ENST00000471245 MGLLQ99685 303 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 SLC25A31Q9H0C2 315 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 ATG5Q9H1Y0 275 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 DCSTAMPQ9H295 470 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 MS4A6AQ9H2W1 248 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 VSIRQ9H7M9 311 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TMEM14BQ9NUH8 114 aa3.25□□□□□ -1.89
CKS1B-204ENST00000471245 MRPL36Q9P0J6 103 aaKnown RBP3.25□□□□□ -1.89
CKS1B-204ENST00000471245 TRAV14DV4A0A0A6YYC5 116 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms