RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 TEN1Q86WV5 123 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 ARL17AQ8IVW1 177 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 LINC00269Q8N2A0 174 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 MMGT1Q8N4V1 131 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 PSMF1Q92530 271 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 ARL11Q969Q4 196 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 SDF2Q99470 211 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 CST11Q9H112 138 aa0.93□□□□□ -2.26
VPS8-220ENST00000469713 LSM2Q9Y333 95 aaKnown RBP0.93□□□□□ -2.26
VPS8-220ENST00000469713 CELSR3Q9NYQ7 3312 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 ADGRB2O60241 1585 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 ARHGAP31Q2M1Z3 1444 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 KIAA1107Q9UPP5 1409 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 ASH1LQ9NR48 2969 aaKnown RBP0.92□□□□□ -2.26
VPS8-220ENST00000469713 PTPRFP10586 1907 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 LOC107986453A0A1B0GWG9 222 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 A6NN06 94 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 FAM25AB3EWG3 89 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 FAM25CB3EWG5 89 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 FAM25GB3EWG6 89 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 TPST1O60507 370 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 TRACP01848 142 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 CCL4P13236 92 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 PCBD1P61457 104 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 EMX2Q04743 252 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 CIRBPQ14011 172 aaKnown RBP0.92□□□□□ -2.26
VPS8-220ENST00000469713 ZNF833PQ6ZTB9 187 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 C10orf111Q8N326 155 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 OTOSQ8NHW6 89 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 TMEM254Q8TBM7 123 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 C4orf3Q8WVX3 66 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 C1orf54Q8WWF1 131 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 MAGOHBQ96A72 148 aaKnown RBP0.92□□□□□ -2.26
VPS8-220ENST00000469713 MUCL1Q96DR8 90 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 LAMB4A4D0S4 1761 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 KIDINS220Q9ULH0 1771 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 KALRNO60229 2985 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 NALCNQ8IZF0 1738 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 PDZD2O15018 2839 aa0.92□□□□□ -2.26
VPS8-220ENST00000469713 TNS3Q68CZ2 1445 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 EML5Q05BV3 1969 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 C3orf85A0A1B0GTC6 90 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 SPAARA0A1B0GVQ0 90 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 ATP6V1G2-DDX39BF2Z307 99 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 PITX3O75364 302 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 ERC2-IT1O76042 136 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 SAA1P0DJI8 122 aaPredicted RBP0.91□□□□□ -2.26
VPS8-220ENST00000469713 HIST1H1BP16401 226 aaKnown RBP0.91□□□□□ -2.26
VPS8-220ENST00000469713 S100A1P23297 94 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 CKS2P33552 79 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 MIR22HGQ0VDD5 57 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 MPV17LQ2QL34 196 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 MIC13Q5XKP0 118 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 ZCCHC23Q6ZST2 131 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 ARPINQ7Z6K5 226 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 OR5AS1Q8N127 324 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 OR10AC1Q8NH08 325 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 OR5AK2Q8NH90 309 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 PATE1Q8WXA2 126 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 DPH3Q96FX2 82 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 SLC35B3Q9H1N7 401 aa0.91□□□□□ -2.26
VPS8-220ENST00000469713 METTL1Q9UBP6 276 aaKnown RBP0.91□□□□□ -2.26
VPS8-220ENST00000469713 FASNP49327 2511 aaKnown RBP0.91□□□□□ -2.26
VPS8-220ENST00000469713 ANK1P16157 1881 aa0.9□□□□□ -2.26
VPS8-220ENST00000469713 MCM3APO60318 1980 aa0.9□□□□□ -2.26
VPS8-220ENST00000469713 ATG2AQ2TAZ0 1938 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 IGHV1-24A0A0C4DH33 117 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 A0A0G2JMM0 328 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 A0A1W2PPB8 328 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 KIR3DP1A8MWS1 328 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 MIF4GDA9UHW6 222 aaKnown RBP0.9□□□□□ -2.27
VPS8-220ENST00000469713 NCR2O95944 276 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 CXCL8P10145 99 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 PRB4P10163 310 aaPredicted RBP0.9□□□□□ -2.27
VPS8-220ENST00000469713 PLGLB1Q02325 96 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 SPRNQ5BIV9 151 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 IZUMO2Q6UXV1 221 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 FOXI2Q6ZQN5 318 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 GKN2Q86XP6 184 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 GNG8Q9UK08 70 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 WDR7Q9Y4E6 1490 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 MYO9AB2RTY4 2548 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 CASZ1Q86V15 1759 aa0.9□□□□□ -2.27
VPS8-220ENST00000469713 FGD6Q6ZV73 1430 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 ERBINQ96RT1 1412 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 SIP14410 1827 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 KIAA1549LQ6ZVL6 1849 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 ZFYVE26Q68DK2 2539 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 RYR1P21817 5038 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 GRIN2AQ12879 1464 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 MBD5Q9P267 1494 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 TRBV20-1A0A075B6N2 111 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 FAM92AA1XBS5 289 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 F6UZH7 168 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 CCDC179H3BU77 68 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 CDC42EP2O14613 210 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 CCL25O15444 150 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 CCL16O15467 120 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 EDF1O60869 148 aaKnown RBP0.89□□□□□ -2.27
VPS8-220ENST00000469713 IFNGP01579 166 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms