RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 TOR2AQ5JU69 321 aa11.93□□□□□ -0.5
TTC28-205ENST00000469670 Q8N976 141 aa11.93□□□□□ -0.5
TTC28-205ENST00000469670 PAXXQ9BUH6 204 aa11.93□□□□□ -0.5
TTC28-205ENST00000469670 COX11Q9Y6N1 276 aa11.93□□□□□ -0.5
TTC28-205ENST00000469670 TYMSP04818 313 aa11.92□□□□□ -0.5
TTC28-205ENST00000469670 RPL37AP61513 92 aaKnown RBP11.92□□□□□ -0.5
TTC28-205ENST00000469670 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
TTC28-205ENST00000469670 NPCDR1Q9BY65 106 aa11.92□□□□□ -0.5
TTC28-205ENST00000469670 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
TTC28-205ENST00000469670 IGHV3-73A0A0B4J1V6 119 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 IGSF23A1L1A6 192 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 C5orf51A6NDU8 294 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 FAM25EA8MYX2 175 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 NOL3O60936 208 aaKnown RBP11.91□□□□□ -0.5
TTC28-205ENST00000469670 PVALBP20472 110 aaPredicted RBP11.91□□□□□ -0.5
TTC28-205ENST00000469670 HNRNPA3P51991 378 aaKnown RBP11.91□□□□□ -0.5
TTC28-205ENST00000469670 RANP62826 216 aaKnown RBP11.91□□□□□ -0.5
TTC28-205ENST00000469670 HBG1P69891 147 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 HBG2P69892 147 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 CFAP126Q5VTH2 177 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 TMEM252Q8N6L7 170 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 LYRM2Q9NU23 88 aaPredicted RBP11.91□□□□□ -0.5
TTC28-205ENST00000469670 RNF213Q63HN8 5207 aa11.91□□□□□ -0.5
TTC28-205ENST00000469670 GGTLC3B5MD39 225 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 CIDEAO60543 219 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 INPP1P49441 399 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 ATP6V1FQ16864 119 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 STX12Q86Y82 276 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
TTC28-205ENST00000469670 ATP5SQ99766 215 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 BATF3Q9NR55 127 aa11.9□□□□□ -0.5
TTC28-205ENST00000469670 TRAV21A0A0B4J279 112 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 DIRC3C9JPN6 131 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 IGLV2-11P01706 119 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 S100A5P33763 92 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 ZNF876PQ49A33 203 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 DPPA3Q6W0C5 159 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 TMED6Q8WW62 240 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 RMI2Q96E14 147 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 SDF2L1Q9HCN8 221 aa11.89□□□□□ -0.51
TTC28-205ENST00000469670 MT1HL1P0DM35 61 aa11.88□□□□□ -0.51
TTC28-205ENST00000469670 SH3BGRL3Q9H299 93 aa11.88□□□□□ -0.51
TTC28-205ENST00000469670 OR7C2O60412 319 aa11.87□□□□□ -0.51
TTC28-205ENST00000469670 BTCP35070 178 aa11.87□□□□□ -0.51
TTC28-205ENST00000469670 S100A10P60903 97 aa11.87□□□□□ -0.51
TTC28-205ENST00000469670 SPANXN2Q5MJ10 180 aa11.87□□□□□ -0.51
TTC28-205ENST00000469670 TRIQKQ629K1 86 aa11.87□□□□□ -0.51
TTC28-205ENST00000469670 KCNS1Q96KK3 526 aa11.87□□□□□ -0.51
TTC28-205ENST00000469670 IGKV2D-24A0A075B6R9 120 aa11.86□□□□□ -0.51
TTC28-205ENST00000469670 F6UZH7 168 aa11.86□□□□□ -0.51
TTC28-205ENST00000469670 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
TTC28-205ENST00000469670 THAP6Q8TBB0 222 aa11.86□□□□□ -0.51
TTC28-205ENST00000469670 ASB13Q8WXK3 278 aa11.86□□□□□ -0.51
TTC28-205ENST00000469670 LRP2P98164 4655 aa11.86□□□□□ -0.51
TTC28-205ENST00000469670 TRAV8-1A0A0A6YYK1 113 aa11.85□□□□□ -0.51
TTC28-205ENST00000469670 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
TTC28-205ENST00000469670 C2orf50Q96LR7 162 aa11.85□□□□□ -0.51
TTC28-205ENST00000469670 HYLS1Q96M11 299 aa11.85□□□□□ -0.51
TTC28-205ENST00000469670 GAGE12JA6NER3 117 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 CENPXA8MT69 81 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 UBE2L3P68036 154 aaKnown RBP11.84□□□□□ -0.51
TTC28-205ENST00000469670 GAGE1Q13065 139 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 GAGE4Q13068 117 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 GAGE5Q13069 117 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 GAGE13Q4V321 117 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
TTC28-205ENST00000469670 A6NHS1 94 aa11.83□□□□□ -0.52
TTC28-205ENST00000469670 LINC00694P0DN24 101 aa11.83□□□□□ -0.52
TTC28-205ENST00000469670 RAB32Q13637 225 aa11.83□□□□□ -0.52
TTC28-205ENST00000469670 CNPY1Q3B7I2 92 aa11.83□□□□□ -0.52
TTC28-205ENST00000469670 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
TTC28-205ENST00000469670 TREM1Q9NP99 234 aa11.83□□□□□ -0.52
TTC28-205ENST00000469670 CMTM2Q8TAZ6 248 aa11.82□□□□□ -0.52
TTC28-205ENST00000469670 KCNIP2Q9NS61 270 aa11.82□□□□□ -0.52
TTC28-205ENST00000469670 URGCP-MRPS24S4R325 110 aa11.82□□□□□ -0.52
TTC28-205ENST00000469670 A0A087WWC5 75 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 PGPEP1LA6NFU8 196 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 SEC11BP0C7V7 166 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 NHLH2Q02577 135 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 IL15RAQ13261 267 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 ZNF506Q5JVG8 444 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 GOLT1AQ6ZVE7 132 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 CYB561D1Q8N8Q1 229 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 OR5C1Q8NGR4 320 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 C9orf85Q96MD7 179 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 NMES1Q9C002 83 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 KLK12Q9UKR0 248 aa11.81□□□□□ -0.52
TTC28-205ENST00000469670 PGPA6NDG6 321 aa11.8□□□□□ -0.52
TTC28-205ENST00000469670 PTH2Q96A98 100 aa11.8□□□□□ -0.52
TTC28-205ENST00000469670 UBE2WQ96B02 151 aa11.8□□□□□ -0.52
TTC28-205ENST00000469670 OTORQ9NRC9 128 aa11.8□□□□□ -0.52
TTC28-205ENST00000469670 C14orf177Q52M58 125 aa11.79□□□□□ -0.52
TTC28-205ENST00000469670 NIT1Q86X76 327 aa11.79□□□□□ -0.52
TTC28-205ENST00000469670 SEC22CQ9BRL7 303 aa11.79□□□□□ -0.52
TTC28-205ENST00000469670 WDR61Q9GZS3 305 aaKnown RBP11.79□□□□□ -0.52
TTC28-205ENST00000469670 C11orf21Q9P2W6 132 aa11.79□□□□□ -0.52
TTC28-205ENST00000469670 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
TTC28-205ENST00000469670 FAM74A1Q5RGS3 127 aa11.78□□□□□ -0.52
TTC28-205ENST00000469670 Q6ZRU5 148 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 440.7 ms