RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 A0A0J9YWU9 116 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 CTXND1A0A1B0GTU2 59 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 FBLL1A6NHQ2 334 aaKnown RBP4.49□□□□□ -1.69
PTCD3-208ENST00000469585 H7BYZ3 331 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 SOCS3O14543 225 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 BCL2L11O43521 198 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 IFNA7P01567 189 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 SLC25A5P05141 298 aaKnown RBP4.49□□□□□ -1.69
PTCD3-208ENST00000469585 GPX1P07203 203 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 SPART-AS1P0CW21 52 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 IGLC2P0DOY2 106 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 PYYP10082 97 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 RAB5CP51148 216 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 EMP1P54849 157 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 FXYD7P58549 80 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 SPINK13Q1W4C9 94 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 DPPA3Q6W0C5 159 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 MIR17HGQ75NE6 70 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 IGF2BP2-AS1Q96M15 143 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 SLC25A2Q9BXI2 301 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 GFRA4Q9GZZ7 299 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 Q9H3A6 140 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 OTORQ9NRC9 128 aa4.49□□□□□ -1.69
PTCD3-208ENST00000469585 RBAKDNA6NC62 111 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 PGPA6NDG6 321 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 F6UB75 175 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 H3BTX0 84 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 M0R2Z0 102 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 GAS8-AS1O95177 125 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 IFNA1P01562 189 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 SNRPCP09234 159 aaKnown RBP4.48□□□□□ -1.69
PTCD3-208ENST00000469585 ARL14EPLP0DKL9 152 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 GCSAMLQ5JQS6 135 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 RPL7L1Q6DKI1 246 aaKnown RBP4.48□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF493Q6ZR52 646 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 TCTE3Q8IZS6 198 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 KCNRGQ8N5I3 272 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 ARL6IP6Q8N6S5 226 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 C16orf74Q96GX8 76 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 ODF3Q96PU9 254 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 SLC35B3Q9H1N7 401 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF586Q9NXT0 402 aa4.48□□□□□ -1.69
PTCD3-208ENST00000469585 MAP1LC3B2A6NCE7 125 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 RNF222A6NCQ9 220 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF705FA8MVS1 300 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-208ENST00000469585 H3BQ15 152 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 SLC17A3O00476 420 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 NMBP08949 121 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 SEC11BP0C7V7 166 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF705DP0CH99 300 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF705BP0CI00 300 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-208ENST00000469585 CT45A10P0DMU9 189 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 GCHFRP30047 84 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF138P52744 262 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 TAS2R60P59551 318 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 DAD1P61803 113 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 UBE2G1P62253 170 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 LGALSLQ3ZCW2 172 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-208ENST00000469585 GDF5OSQ5U4N7 250 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 ZFAND6Q6FIF0 208 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 TMUB2Q71RG4 321 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 BAP18Q8IXM2 172 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 EXOC3-AS1Q8N2X6 119 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 RPP25LQ8N5L8 163 aaKnown RBP4.47□□□□□ -1.69
PTCD3-208ENST00000469585 C5orf17Q8NAS9 161 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 ZNF680Q8NEM1 530 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 FAM213BQ8TBF2 198 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 TCEAL7Q9BRU2 100 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 MAP1LC3BQ9GZQ8 125 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 WFDC1Q9HC57 220 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 LENEPQ9Y5L5 61 aa4.47□□□□□ -1.69
PTCD3-208ENST00000469585 TRAV8-2A0A0B4J237 113 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 TRAV10A0A0B4J240 114 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 TRBV7-9A0A0J9YWB2 115 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 A0A1W2PRE2 83 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 NDUFAF8A1L188 74 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 C7orf71A4D174 169 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 LYRM9A8MSI8 78 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 ZNF705EA8MWA4 302 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-208ENST00000469585 SMLR1H3BR10 107 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 C1QBP02746 253 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 STAG3L2P0CL84 134 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 STAG3L3P0CL85 134 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 RNASE4P34096 147 aaKnown RBP4.46□□□□□ -1.7
PTCD3-208ENST00000469585 TCTAP57738 103 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 SAPCD1Q5SSQ6 148 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 FAM159AQ6UWV7 190 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 SLC51BQ86UW2 128 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 SFT2D1Q8WV19 159 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 FXYD5Q96DB9 178 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 PHYHIPLQ96FC7 376 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 PYGO2Q9BRQ0 406 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 SH3BGRL3Q9H299 93 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 TIMM8BQ9Y5J9 83 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-208ENST00000469585 DNHD1Q96M86 4753 aa4.46□□□□□ -1.7
PTCD3-208ENST00000469585 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 IGKV2-40A0A087WW87 121 aaPredicted RBP4.45□□□□□ -1.7
PTCD3-208ENST00000469585 TRAV12-3A0A0B4J271 114 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 H7C423 109 aa4.45□□□□□ -1.7
PTCD3-208ENST00000469585 M0R3E3 92 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms