RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 PAGE4O60829 102 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 GCGP01275 180 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 P0DMU3 169 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 FAM231AP0DMU4 169 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 FAM231CP0DMU5 169 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 CCL20P78556 96 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 ZNF415Q09FC8 603 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 LGALS9BQ3B8N2 356 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 COX8CQ7Z4L0 72 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 SFT2D1Q8WV19 159 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 VSIG2Q96IQ7 327 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 NAGKQ9UJ70 344 aa8.12□□□□□ -1.11
MCF2L-222ENST00000469558 TRGV11A0A075B6L2 103 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 TRAV26-1A0A087WT03 109 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 IFNA7P01567 189 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 PFN1P07737 140 aaKnown RBP8.11□□□□□ -1.11
MCF2L-222ENST00000469558 CRIP1P50238 77 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 FAM159AQ6UWV7 190 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 C15orf53Q8NAA6 179 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 RASL10AQ92737 203 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 HIST1H2BAQ96A08 127 aa8.11□□□□□ -1.11
MCF2L-222ENST00000469558 NKX6-2Q9C056 277 aaPredicted RBP8.11□□□□□ -1.11
MCF2L-222ENST00000469558 TRGV2A0A075B6R0 118 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 TRAV1-1A0A0B4J248 108 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 FBLL1A6NHQ2 334 aaKnown RBP8.1□□□□□ -1.11
MCF2L-222ENST00000469558 K7EQM0 130 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 SULT1A2P50226 295 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 EIF5AP63241 154 aaKnown RBP8.1□□□□□ -1.11
MCF2L-222ENST00000469558 RNF212Q495C1 297 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 SMUG1Q53HV7 270 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 SLC51BQ86UW2 128 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 ZC2HC1AQ96GY0 325 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
MCF2L-222ENST00000469558 A0A0J9YY99 117 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 SCO2A0A1W2PP80 73 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 H3BNG1 76 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 LTAP01374 205 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 IGHV3-53P01767 116 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 RNASE3P12724 160 aaKnown RBP8.09□□□□□ -1.11
MCF2L-222ENST00000469558 OR5I1Q13606 314 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 FHL2Q14192 279 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 SAPCD1Q5SSQ6 148 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 CST9LP1Q5W188 147 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 Q6ZR54 194 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 ZNF479Q96JC4 524 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 C9orf85Q96MD7 179 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 TCEAL7Q9BRU2 100 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 SPXQ9BT56 116 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 SDF2L1Q9HCN8 221 aa8.09□□□□□ -1.11
MCF2L-222ENST00000469558 NUDT3O95989 172 aa8.08□□□□□ -1.12
MCF2L-222ENST00000469558 SFTA3P0C7M3 94 aa8.08□□□□□ -1.12
MCF2L-222ENST00000469558 ZNRF2Q8NHG8 242 aa8.08□□□□□ -1.12
MCF2L-222ENST00000469558 FMC1Q96HJ9 113 aa8.08□□□□□ -1.12
MCF2L-222ENST00000469558 LINC00588Q9Y4M8 146 aa8.08□□□□□ -1.12
MCF2L-222ENST00000469558 A0A096LPF7 62 aa8.07□□□□□ -1.12
MCF2L-222ENST00000469558 PPT1P50897 306 aa8.07□□□□□ -1.12
MCF2L-222ENST00000469558 RAB5CP51148 216 aa8.07□□□□□ -1.12
MCF2L-222ENST00000469558 NKX2-5P52952 324 aaPredicted RBP8.07□□□□□ -1.12
MCF2L-222ENST00000469558 KCNS1Q96KK3 526 aa8.07□□□□□ -1.12
MCF2L-222ENST00000469558 MLST8Q9BVC4 326 aa8.07□□□□□ -1.12
MCF2L-222ENST00000469558 M0R2P5 195 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 SH2D1AO60880 128 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 CRYBA4P53673 196 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 ESRGQ1W209 222 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 ZNF674Q2M3X9 581 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 ZFP69Q49AA0 526 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 C11orf52Q96A22 123 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 DERL1Q9BUN8 251 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 GNG13Q9P2W3 67 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 ZFP30Q9Y2G7 519 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 PKD1P98161 4303 aa8.06□□□□□ -1.12
MCF2L-222ENST00000469558 IGLV2-18A0A075B6J9 118 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 PGPEP1LA6NFU8 196 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 FABP5P3A8MUU1 101 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 KRBOX1C9JBD0 128 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 RTL8CO15255 209 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 AKR1C3P42330 323 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 EIF5AL1Q6IS14 154 aaKnown RBP8.05□□□□□ -1.12
MCF2L-222ENST00000469558 UBE2DNLQ8IWF7 75 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 PTH2Q96A98 100 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 MANBALQ9NQG1 85 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 BOLA1Q9Y3E2 137 aa8.05□□□□□ -1.12
MCF2L-222ENST00000469558 TRAV4A0A0B4J268 109 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 M0R2N4 97 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 FAM3BP58499 235 aaPredicted RBP8.04□□□□□ -1.12
MCF2L-222ENST00000469558 UBE2G1P62253 170 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 LINC01559Q495D7 138 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 ZNF506Q5JVG8 444 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 DNLZQ5SXM8 178 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 CFAP126Q5VTH2 177 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
MCF2L-222ENST00000469558 RS1O15537 224 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 PAX4O43316 350 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 IGLV2-8P01709 118 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 ZNF876PQ49A33 203 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms