RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 WDR73Q6P4I2 378 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 TMEM88Q6PEY1 159 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 CBLN2Q8IUK8 224 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 KIR2DL5AQ8N109 375 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 KIR2DL5BQ8NHK3 375 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 NAT8BQ9UHF3 227 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 M0R2Z0 102 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 IGKV3-20P01619 116 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 ORM1P02763 201 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 TYMSP04818 313 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 IGLC6P0CF74 106 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 MED14OSP0DP75 135 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 KRTAP10-11P60412 298 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 RPL19P84098 196 aaKnown RBP9.33□□□□□ -0.92
TRAF4-208ENST00000469529 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
TRAF4-208ENST00000469529 TMEM256Q8N2U0 113 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 DEFB125Q8N687 156 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 GTSF1Q8WW33 167 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 CNFNQ9BYD5 112 aa9.33□□□□□ -0.92
TRAF4-208ENST00000469529 F2Z2F3 143 aa9.32□□□□□ -0.92
TRAF4-208ENST00000469529 RASL11AQ6T310 242 aa9.32□□□□□ -0.92
TRAF4-208ENST00000469529 CSNK1G2-AS1Q8NCQ2 148 aa9.32□□□□□ -0.92
TRAF4-208ENST00000469529 NUP35Q8NFH5 326 aa9.32□□□□□ -0.92
TRAF4-208ENST00000469529 NEU1Q99519 415 aa9.32□□□□□ -0.92
TRAF4-208ENST00000469529 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
TRAF4-208ENST00000469529 CMYA5Q8N3K9 4069 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 IGHV1OR15-1A0A075B7D0 117 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 TRAV12-3A0A0B4J271 114 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 HIGD1CA8MV81 97 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 CA1P00915 261 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-208ENST00000469529 INSP01308 110 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 OR5AL1P0C617 328 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 FAM3BP58499 235 aaPredicted RBP9.31□□□□□ -0.92
TRAF4-208ENST00000469529 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 COX19Q49B96 90 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 ATP5L2Q7Z4Y8 100 aa9.31□□□□□ -0.92
TRAF4-208ENST00000469529 IGHV4-4A0A075B6R2 117 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 LOC102724200A0A096LPH7 203 aaPredicted RBP9.3□□□□□ -0.92
TRAF4-208ENST00000469529 A0A1B0GW15 77 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 UBE2CO00762 179 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 SNAI2O43623 268 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 CTRLP40313 264 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 Q6ZQT7 251 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 WFDC10AQ9H1F0 79 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 SRD5A3Q9H8P0 318 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 SCRT2Q9NQ03 307 aa9.3□□□□□ -0.92
TRAF4-208ENST00000469529 NOTCH1P46531 2555 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 G3V4G9 280 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 J3KRW8 73 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 RBMY1A1P0DJD3 496 aaKnown RBP9.29□□□□□ -0.92
TRAF4-208ENST00000469529 RBMY1CP0DJD4 496 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 RBMY1FQ15415 496 aaKnown RBP9.29□□□□□ -0.92
TRAF4-208ENST00000469529 C1orf158Q8N1D5 194 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 FER1L6-AS1Q8NA97 138 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 PTH2Q96A98 100 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 FAM210BQ96KR6 192 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 URGCP-MRPS24S4R325 110 aa9.29□□□□□ -0.92
TRAF4-208ENST00000469529 A0A1B0GUT8 65 aa9.28□□□□□ -0.92
TRAF4-208ENST00000469529 ASIPP42127 132 aa9.28□□□□□ -0.92
TRAF4-208ENST00000469529 APOC4P55056 127 aa9.28□□□□□ -0.92
TRAF4-208ENST00000469529 ZNF705AQ6ZN79 300 aaPredicted RBP9.28□□□□□ -0.92
TRAF4-208ENST00000469529 XCL2Q9UBD3 114 aa9.28□□□□□ -0.92
TRAF4-208ENST00000469529 TRGV11A0A075B6L2 103 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 TGIF2-C20orf24A0A0A6YYL0 155 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 A0A1B0GXF2 115 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 GNRH2O43555 120 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 IGHV4-30-4P0DP06 118 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 GZMBP10144 247 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
TRAF4-208ENST00000469529 RPL35AP18077 110 aaKnown RBP9.27□□□□□ -0.93
TRAF4-208ENST00000469529 RAB5AP20339 215 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 FXYD7P58549 80 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 CACNG7P62955 275 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 LYZL1Q6UWQ5 148 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 C9orf85Q96MD7 179 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 LINC01587Q99440 93 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 GNB1LQ9BYB4 327 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 GOLT1BQ9Y3E0 138 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 AGRNO00468 2067 aa9.27□□□□□ -0.93
TRAF4-208ENST00000469529 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 IGHV3-16A0A0C4DH30 117 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 GRIFINA4D1Z8 144 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 SMIM9A6NGZ8 99 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 S100A8P05109 93 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 ARMS2P0C7Q2 107 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 TCL1AP56279 114 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 RIGQ13278 110 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 MUC21Q5SSG8 566 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 ZNF493Q6ZR52 646 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 PGLYRP4Q96LB8 373 aa9.26□□□□□ -0.93
TRAF4-208ENST00000469529 NXPH4O95158 308 aa9.25□□□□□ -0.93
TRAF4-208ENST00000469529 Q6ZWC4 215 aa9.25□□□□□ -0.93
TRAF4-208ENST00000469529 SPXQ9BT56 116 aa9.25□□□□□ -0.93
TRAF4-208ENST00000469529 NDUFAF3Q9BU61 184 aa9.25□□□□□ -0.93
TRAF4-208ENST00000469529 MT-ND6P03923 174 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms