RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 GFI1BQ5VTD9 330 aa12.85□□□□□ -0.35
RPL39-202ENST00000468844 C19orf71A6NCJ1 209 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 CRXO43186 299 aaPredicted RBP12.84□□□□□ -0.35
RPL39-202ENST00000468844 RPL35AP18077 110 aaKnown RBP12.84□□□□□ -0.35
RPL39-202ENST00000468844 LEPP41159 167 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 PYY3Q5JQD4 70 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 IBA57Q5T440 356 aaKnown RBP12.84□□□□□ -0.35
RPL39-202ENST00000468844 SFRP2Q96HF1 295 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 TSPOP30536 169 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
RPL39-202ENST00000468844 RNASE4P34096 147 aaKnown RBP12.83□□□□□ -0.36
RPL39-202ENST00000468844 SH2D1AO60880 128 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 KPRPQ5T749 579 aaPredicted RBP12.82□□□□□ -0.36
RPL39-202ENST00000468844 Q6AWC8 147 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 FAM231DQ6ZW35 169 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 NUDT10Q8NFP7 164 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 OR10D4PQ8NGN7 298 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 NUDT11Q96G61 164 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 GIG44P09565 113 aaPredicted RBP12.82□□□□□ -0.36
RPL39-202ENST00000468844 IGHV4-30-4P0DP06 118 aa12.82□□□□□ -0.36
RPL39-202ENST00000468844 NUTF2P61970 127 aaKnown RBP12.82□□□□□ -0.36
RPL39-202ENST00000468844 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 C7orf71A4D174 169 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 FABP5P3A8MUU1 101 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 RBMY1A1P0DJD3 496 aaKnown RBP12.81□□□□□ -0.36
RPL39-202ENST00000468844 RBMY1CP0DJD4 496 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 FAM3BP58499 235 aaPredicted RBP12.81□□□□□ -0.36
RPL39-202ENST00000468844 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
RPL39-202ENST00000468844 PDZD11Q5EBL8 140 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 OSTCQ9NRP0 149 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 XCL2Q9UBD3 114 aa12.81□□□□□ -0.36
RPL39-202ENST00000468844 ZNF324O75467 553 aaPredicted RBP12.8□□□□□ -0.36
RPL39-202ENST00000468844 TENM3Q9P273 2699 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 TRAV21A0A0B4J279 112 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 A0A1W2PPQ1 181 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 P01737 135 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 TYMSP04818 313 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 RPL19P84098 196 aaKnown RBP12.8□□□□□ -0.36
RPL39-202ENST00000468844 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 DAZAP1Q96EP5 407 aaKnown RBP12.8□□□□□ -0.36
RPL39-202ENST00000468844 V9GYV3 84 aa12.8□□□□□ -0.36
RPL39-202ENST00000468844 PRB2P02812 416 aaPredicted RBP12.79□□□□□ -0.36
RPL39-202ENST00000468844 FABP4P15090 132 aa12.79□□□□□ -0.36
RPL39-202ENST00000468844 MUC4Q99102 2169 aa12.79□□□□□ -0.36
RPL39-202ENST00000468844 PRKDCP78527 4128 aaKnown RBP12.79□□□□□ -0.36
RPL39-202ENST00000468844 LOC102724200A0A096LPH7 203 aaPredicted RBP12.78□□□□□ -0.36
RPL39-202ENST00000468844 CA1P00915 261 aaPredicted RBP12.78□□□□□ -0.36
RPL39-202ENST00000468844 MORN3Q6PF18 240 aaPredicted RBP12.78□□□□□ -0.36
RPL39-202ENST00000468844 ZNF705GA8MUZ8 300 aaPredicted RBP12.78□□□□□ -0.36
RPL39-202ENST00000468844 COA6Q5JTJ3 125 aaKnown RBP12.78□□□□□ -0.36
RPL39-202ENST00000468844 DNLZQ5SXM8 178 aa12.78□□□□□ -0.36
RPL39-202ENST00000468844 ZNF575Q86XF7 245 aa12.78□□□□□ -0.36
RPL39-202ENST00000468844 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
RPL39-202ENST00000468844 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
RPL39-202ENST00000468844 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.36
RPL39-202ENST00000468844 IGKV3D-20A0A0C4DH25 116 aa12.77□□□□□ -0.37
RPL39-202ENST00000468844 GATCO43716 136 aaKnown RBP12.77□□□□□ -0.37
RPL39-202ENST00000468844 INSP01308 110 aa12.77□□□□□ -0.37
RPL39-202ENST00000468844 LINC01559Q495D7 138 aa12.77□□□□□ -0.37
RPL39-202ENST00000468844 CSTL1Q9H114 145 aa12.77□□□□□ -0.37
RPL39-202ENST00000468844 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
RPL39-202ENST00000468844 AMBPP02760 352 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 ORM1P02763 201 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 MUC21Q5SSG8 566 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 CDPF1Q6NVV7 123 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 CSNK1G2-AS1Q8NCQ2 148 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 BTF3L4Q96K17 158 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 TMSB15BA0A087X1C1 80 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 A8MZ25 164 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 OR2D3Q8NGH3 330 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 PACRGQ96M98 296 aaPredicted RBP12.76□□□□□ -0.37
RPL39-202ENST00000468844 C1QTNF4Q9BXJ3 329 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 DNAH9Q9NYC9 4486 aa12.76□□□□□ -0.37
RPL39-202ENST00000468844 ANXA2RQ3ZCQ2 193 aa12.75□□□□□ -0.37
RPL39-202ENST00000468844 C1orf158Q8N1D5 194 aa12.75□□□□□ -0.37
RPL39-202ENST00000468844 COL7A1Q02388 2944 aa12.75□□□□□ -0.37
RPL39-202ENST00000468844 KIR2DL5BA0A0G2JN68 375 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 KIR2DL5BA0A0G2JPC4 375 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 XKRY2A2RUG3 117 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 TMEM189A5PLL7 270 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 GZMBP10144 247 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 CT83Q5H943 113 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 KIR2DL5AQ8N109 375 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 KIR2DL5BQ8NHK3 375 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 HUWE1Q7Z6Z7 4374 aaKnown RBP12.74□□□□□ -0.37
RPL39-202ENST00000468844 FAM159AQ6UWV7 190 aa12.74□□□□□ -0.37
RPL39-202ENST00000468844 K7EIL1 84 aa12.73□□□□□ -0.37
RPL39-202ENST00000468844 APOC4P55056 127 aa12.73□□□□□ -0.37
RPL39-202ENST00000468844 TDRG1Q3Y452 100 aa12.73□□□□□ -0.37
RPL39-202ENST00000468844 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
RPL39-202ENST00000468844 IGHV1OR15-1A0A075B7D0 117 aa12.72□□□□□ -0.37
RPL39-202ENST00000468844 GRIFINA4D1Z8 144 aa12.72□□□□□ -0.37
RPL39-202ENST00000468844 PRM2P04554 102 aa12.72□□□□□ -0.37
RPL39-202ENST00000468844 TSKUQ8WUA8 353 aa12.72□□□□□ -0.37
RPL39-202ENST00000468844 GTSF1Q8WW33 167 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms