RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ZNF138P52744 262 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 TAS2R60P59551 318 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 OR5I1Q13606 314 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 CENPWQ5EE01 88 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 FOXI2Q6ZQN5 318 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 GTSCR1Q86UQ5 136 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 EIF4E3Q8N5X7 224 aaKnown RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM75Q8N9X5 138 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 OCC1Q8TAD7 63 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 C11orf52Q96A22 123 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 MRPL53Q96EL3 112 aaKnown RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 TVP23CQ96ET8 276 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 FMC1Q96HJ9 113 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 LINC00477Q96M19 166 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 NIPSNAP3BQ9BS92 247 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 NDFIP1Q9BT67 221 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 GPR61Q9BZJ8 451 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 SAV1Q9H4B6 383 aaPredicted RBP3□□□□□ -1.93
TMEM39A-204ENST00000468545 TUBA4BQ9H853 241 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 NAT8Q9UHE5 227 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 ARL2-SNX15V9GYD0 113 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 ATRQ13535 2644 aa3□□□□□ -1.93
TMEM39A-204ENST00000468545 TRAV12-2A0A075B6T6 113 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 IGHV3OR16-12A0A075B7B8 117 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 TMSB15BA0A087X1C1 80 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 A0A1B0GUV1 79 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SERTM2A0A1B0GWG4 89 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 RBAKDNA6NC62 111 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 KRBOX1C9JBD0 128 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 H3BMM0 161 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 M0R2Z0 102 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 GCGP01275 180 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 IGLV2-11P01706 119 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 GPX1P07203 203 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 HTN1P15515 57 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 ADCYAP1P18509 176 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 LEPP41159 167 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 ERVFC1-1P60608 527 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SSTP61278 116 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 RPL23P62829 140 aaKnown RBP2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SPINK13Q1W4C9 94 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 FAM74A3Q4VXF1 159 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SMUG1Q53HV7 270 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 DEFB121Q5J5C9 76 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SAPCD1Q5SSQ6 148 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 Q6ZQT7 251 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 Q86TA4 180 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM183AQ8IXX5 376 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 IGF2BP2-AS1Q96M15 143 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 TCEAL7Q9BRU2 100 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SEC11CQ9BY50 192 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SRD5A3Q9H8P0 318 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 SDF2L1Q9HCN8 221 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 RPS10P5Q9NQ39 176 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 ZNF492Q9P255 531 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 XCL2Q9UBD3 114 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 NAGKQ9UJ70 344 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 ZFP30Q9Y2G7 519 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 KLF12Q9Y4X4 402 aa2.99□□□□□ -1.93
TMEM39A-204ENST00000468545 TRBV20OR9-2A0A075B6H5 130 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 TRAV12-3A0A0B4J271 114 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 RBMY1BA6NDE4 496 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 RBMY1EA6NEQ0 496 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 FBLL1A6NHQ2 334 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 ZNF705GA8MUZ8 300 aaPredicted RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 C9JCJ5 164 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 K7EN84 100 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 GATCO43716 136 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 SH2D1AO60880 128 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 LTAP01374 205 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 IGLV2-8P01709 118 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 ORM1P02763 201 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 RBMY1DP0C7P1 496 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 HLA-DRB4P13762 266 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 S100A1P23297 94 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 TSPOP30536 169 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 CRIP1P50238 77 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 ZNF80P51504 273 aaPredicted RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 BTN1A1Q13410 526 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 MUC21Q5SSG8 566 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 PRR9Q5T870 116 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 LINC00322Q6ZN03 302 aaPredicted RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 LINC01551Q86U37 167 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 ARL6IP6Q8N6S5 226 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 OR10G8Q8NGN5 311 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 ZC2HC1AQ96GY0 325 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 LINC01587Q99440 93 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 CSTL1Q9H114 145 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 RNASE7Q9H1E1 156 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 ZMAT5Q9UDW3 170 aaKnown RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 TIMM8BQ9Y5J9 83 aaPredicted RBP2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 HLA-DRB4X5D2U9 266 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 TENM1Q9UKZ4 2725 aa2.98□□□□□ -1.93
TMEM39A-204ENST00000468545 SORL1Q92673 2214 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 LOC102724200A0A096LPH7 203 aaPredicted RBP2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TRAV21A0A0B4J279 112 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TRBV6-1A0A0K0K1D8 114 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 C7orf77A4D0Y5 90 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 GRIFINA4D1Z8 144 aa2.97□□□□□ -1.93
TMEM39A-204ENST00000468545 TMEM189A5PLL7 270 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms